ATIDB : The Arabidopsis thaliana Integrated Database

Home Genome Browser BLAST Gene Traps Sub-Seq Contact

The selected flanking sequence (T-DNA_LB.SALK_016885) is bold high-lighted in the flanking sequence table below
Line
   
Line Identifier
 T-DNA.SALK_016885
Class
 T-DNA
Ecotype
 Columbia
Source
 Joseph R. Ecker, Salk Institute Genomic Analysis Laboratory (SIGnAL)
Pedigree
NASC stock code
 N516885 (Search NASC catalogue)
ABRC stock code
 SALK_016885 (ABRC catalogue)

Flanking Sequence(s)
   
Line Identifier
 T-DNA_LB.SALK_016885
Accession
 BH254649 (EMBL record) (NCBI record)
Primer direction
 LB
Mapping Score
 5 (FAQ)
Chromosome
4
Insert Position
 239505
Insert Validation
 One-click WU-BLASTN
Orientation
 R->L
Sequence
 
ATGGTGCTAACGCGATCACATTCTGTCTTACACGCCACGAATATTATACGCTGGAGATAGCTAGTCGCAGTGTGC
GAGCTCGGTGCGCCGATCGGAACATCGTCGTTGCGCCAGAATGACACGCAGGCGGAGAGCGCCTGGACGCACCAC
GGCTGCGGCTCATGATAGACGACGGCACTACTGTCTCTATGAATGGGACATGACCTAGCCCCATCAGGACGAATA
CTCCTGTGGACCATAGCTCACTGCGATAAGAGAGATTGGAATTGCTAAGGTTGGCACAACGCAGTCTAAGAGTAC
TACGTAAAAGAAATGGAAGAATTGCAGCCCGGGCCGTCGACCACGCGTGCCCTATAGGGAGTCGTAATTGGGGGG
GTGGCGGGGGGGGTGACGGGTGTGGGGGGGGGGGGGGCGCGCGGCGGGGGCGGGGCGCGCCGTGGGGCGGGTAGG
TTGTCGGCGCGGGTGCGGGGCGGCGCGTTGGCGGCGGGCGTACTGGAGGGGCCTCAGCCGCGGCGGCCGGGCGCC
TTTTTGGGTGTCGCGC
Length
 541