| Sequence |
|---|
AATGTTAAAGCCTATTTACGAAGAGGAACCGCAAGAGAAATGTTAGGCGATTGCAAGGGAGCCATAGAAGGTAAGCTTTAAAGAACATAATCTGATTGTT
TTTTCGCCTTGTAGAATCTGGCAGAATATAACATAAACTCTGCAGATTTCAGATACGCACTTGTGCTGGAACCAAACAACAAACGAGCGTCTCTCTCAGC
AGAGAGACTGAGAAAATTCCAGTGAGCTTCTTTTGTCCGTACCTCACCGATCATTGAGAAAACGTTTGTTCCTTAGAATTTGTCCAAGAGTATAGGCCAA
TTTTGTCAACACTTGTCTTTTGCGTCTGATATTTAGGCATTTTATCTAGAGATACCTTTTGCAAGTCCGCCGAGAATGGAAAATTATAATATCCGATGTT
TATTTTAAACGTTCTCTAAAATTGGATATCAAAAAGTAATGTTAATCTTAAACACCGGATACCGGCATTCCCGGTCGACTTCTAGTCAGCGTAGCGTCAA
AAATAAGGTCATGTCTTTAACTATCTTGTCTTTATCATTTTCTTTTCTCGCACGTTATCTCCTCCCCACGACTCAAAAAAAATAAACAGAAAAAAAGAGG
AG |
| Oligo 1 | |||
|---|---|---|---|
| PRIMER_PAIR_COMPL_ANY | 5.00 | ||
| PRIMER_PRODUCT_SIZE | 299 | ||
| PRIMER_PAIR_PENALTY | 0.2025 | ||
| PRIMER_PAIR_COMPL_END | 0.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_GC_PERCENT | 40.000 | PRIMER_RIGHT_GC_PERCENT | 50.000 |
| PRIMER_LEFT_POSITION | 166 | PRIMER_RIGHT_POSITION | 464 |
| PRIMER_LEFT_PENALTY | 0.019325 | PRIMER_RIGHT_PENALTY | 0.183145 |
| PRIMER_LEFT_SELF_END | 0.00 | PRIMER_RIGHT_SELF_END | 3.00 |
| PRIMER_LEFT_SEQUENCE | TGGAACCAAACAACAAACGA | PRIMER_RIGHT_SEQUENCE | CCGGTATCCGGTGTTTAAGA |
| PRIMER_LEFT_END_STABILITY | 8.4000 | PRIMER_RIGHT_END_STABILITY | 6.0000 |
| PRIMER_LEFT_TM | 59.981 | PRIMER_RIGHT_TM | 59.817 |
| PRIMER_LEFT_LENGTH | 20 | PRIMER_RIGHT_LENGTH | 20 |
| PRIMER_LEFT_SELF_ANY | 4.00 | PRIMER_RIGHT_SELF_ANY | 6.00 |
| Oligo 2 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_1 | 145 | ||
| PRIMER_PAIR_PENALTY_1 | 0.2222 | ||
| PRIMER_PAIR_1_COMPL_END | 2.00 | ||
| PRIMER_PAIR_1_COMPL_ANY | 3.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_1_TM | 60.096 | PRIMER_RIGHT_1_TM | 60.127 |
| PRIMER_LEFT_1_END_STABILITY | 8.5000 | PRIMER_RIGHT_1_END_STABILITY | 8.5000 |
| PRIMER_LEFT_1_GC_PERCENT | 45.000 | PRIMER_RIGHT_1_GC_PERCENT | 40.000 |
| PRIMER_LEFT_1_SEQUENCE | AATGTTAGGCGATTGCAAGG | PRIMER_RIGHT_1_SEQUENCE | TTTGTTGTTTGGTTCCAGCA |
| PRIMER_LEFT_1_SELF_ANY | 6.00 | PRIMER_RIGHT_1_SELF_ANY | 4.00 |
| PRIMER_LEFT_1 | 38,20 | PRIMER_RIGHT_1 | 182,20 |
| PRIMER_LEFT_1_SELF_END | 2.00 | PRIMER_RIGHT_1_SELF_END | 2.00 |
| PRIMER_LEFT_1_PENALTY | 0.095629 | PRIMER_RIGHT_1_PENALTY | 0.126538 |
| Oligo 3 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_2 | 133 | ||
| PRIMER_PAIR_2_COMPL_ANY | 4.00 | ||
| PRIMER_PAIR_2_COMPL_END | 1.00 | ||
| PRIMER_PAIR_PENALTY_2 | 0.2247 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_2_END_STABILITY | 8.5000 | PRIMER_RIGHT_2_END_STABILITY | 5.3000 |
| PRIMER_LEFT_2_SEQUENCE | AATGTTAGGCGATTGCAAGG | PRIMER_RIGHT_2_SEQUENCE | TTCCAGCACAAGTGCGTATC |
| PRIMER_LEFT_2_SELF_END | 2.00 | PRIMER_RIGHT_2_SELF_END | 0.00 |
| PRIMER_LEFT_2 | 38,20 | PRIMER_RIGHT_2 | 170,20 |
| PRIMER_LEFT_2_TM | 60.096 | PRIMER_RIGHT_2_TM | 59.871 |
| PRIMER_LEFT_2_GC_PERCENT | 45.000 | PRIMER_RIGHT_2_GC_PERCENT | 50.000 |
| PRIMER_LEFT_2_SELF_ANY | 6.00 | PRIMER_RIGHT_2_SELF_ANY | 6.00 |
| PRIMER_LEFT_2_PENALTY | 0.095629 | PRIMER_RIGHT_2_PENALTY | 0.129070 |
| Oligo 4 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_3 | 155 | ||
| PRIMER_PAIR_PENALTY_3 | 0.2814 | ||
| PRIMER_PAIR_3_COMPL_ANY | 3.00 | ||
| PRIMER_PAIR_3_COMPL_END | 1.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_3_PENALTY | 0.154878 | PRIMER_RIGHT_3_PENALTY | 0.126538 |
| PRIMER_LEFT_3_SELF_END | 2.00 | PRIMER_RIGHT_3_SELF_END | 2.00 |
| PRIMER_LEFT_3_END_STABILITY | 8.7000 | PRIMER_RIGHT_3_END_STABILITY | 8.5000 |
| PRIMER_LEFT_3_GC_PERCENT | 50.000 | PRIMER_RIGHT_3_GC_PERCENT | 40.000 |
| PRIMER_LEFT_3_TM | 59.845 | PRIMER_RIGHT_3_TM | 60.127 |
| PRIMER_LEFT_3_SELF_ANY | 2.00 | PRIMER_RIGHT_3_SELF_ANY | 4.00 |
| PRIMER_LEFT_3_SEQUENCE | CCGCAAGAGAAATGTTAGGC | PRIMER_RIGHT_3_SEQUENCE | TTTGTTGTTTGGTTCCAGCA |
| PRIMER_LEFT_3 | 28,20 | PRIMER_RIGHT_3 | 182,20 |
| Oligo 5 | |||
|---|---|---|---|
| PRIMER_PAIR_4_COMPL_ANY | 4.00 | ||
| PRIMER_PRODUCT_SIZE_4 | 143 | ||
| PRIMER_PAIR_4_COMPL_END | 3.00 | ||
| PRIMER_PAIR_PENALTY_4 | 0.2839 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_4_SEQUENCE | CCGCAAGAGAAATGTTAGGC | PRIMER_RIGHT_4_SEQUENCE | TTCCAGCACAAGTGCGTATC |
| PRIMER_LEFT_4_SELF_END | 2.00 | PRIMER_RIGHT_4_SELF_END | 0.00 |
| PRIMER_LEFT_4_TM | 59.845 | PRIMER_RIGHT_4_TM | 59.871 |
| PRIMER_LEFT_4_PENALTY | 0.154878 | PRIMER_RIGHT_4_PENALTY | 0.129070 |
| PRIMER_LEFT_4 | 28,20 | PRIMER_RIGHT_4 | 170,20 |
| PRIMER_LEFT_4_END_STABILITY | 8.7000 | PRIMER_RIGHT_4_END_STABILITY | 5.3000 |
| PRIMER_LEFT_4_GC_PERCENT | 50.000 | PRIMER_RIGHT_4_GC_PERCENT | 50.000 |
| PRIMER_LEFT_4_SELF_ANY | 2.00 | PRIMER_RIGHT_4_SELF_ANY | 6.00 |
| Sequence |
|---|
ATGACATGTCCACAACTTGAGCGAGTTAGTTTATATGTCTCTTGACTAATCTCTAATGGTTCCCAACTCTGTAACGTTATGTATCAAGGATGATGGCATT
CTGGTAATTCCAACATTGCCAGCTGTTCCTCCAAAACTTGGTAGCAAGGAGATAACATCTGAAGACTATCAAAACCGAGCTTCAAGTCTGCTTAGCATTG
CTAGCATATCAGGATGTTGTCAGGTTAAATCTCTCTCTTTCTCTCTCTCACCTGCCATGCTAGTAAAGTTCCCCTCACACATGTTAAAAGCAACCACTGA
CCAGTCAGTGTTAGCAAAACCAATCCACAGTATATGTGTCTTACATTTATCGTGCTGATGATTCAGGTGACTGTGCCACTCGGACATCATGAGAAATGCC
CTATTTCAGTTTCTTTCATAGGAAGACACGGTGGTGACCGCTTTTTACTAGATACAGTGCAGACAATGTATCCATCTTTGCAAGAGTACTCGAGTATTGT
TACCGATCCCAAATCTTCTAAAAAGGCTATCACCAAAGAAGAGTCAGCCGAGATTGCCAAAGAGAAGGTCAATTAATATCCATTGCATGTCTCATTTTCT
TA |
| Oligo 1 | |||
|---|---|---|---|
| PRIMER_PAIR_COMPL_ANY | 4.00 | ||
| PRIMER_PRODUCT_SIZE | 170 | ||
| PRIMER_PAIR_PENALTY | 0.3000 | ||
| PRIMER_PAIR_COMPL_END | 1.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_GC_PERCENT | 50.000 | PRIMER_RIGHT_GC_PERCENT | 50.000 |
| PRIMER_LEFT_POSITION | 381 | PRIMER_RIGHT_POSITION | 550 |
| PRIMER_LEFT_PENALTY | 0.289438 | PRIMER_RIGHT_PENALTY | 0.010545 |
| PRIMER_LEFT_SELF_END | 1.00 | PRIMER_RIGHT_SELF_END | 0.00 |
| PRIMER_LEFT_SEQUENCE | GGACATCATGAGAAATGCCC | PRIMER_RIGHT_SEQUENCE | TCGGCTGACTCTTCTTTGGT |
| PRIMER_LEFT_END_STABILITY | 11.2000 | PRIMER_RIGHT_END_STABILITY | 8.2000 |
| PRIMER_LEFT_TM | 60.289 | PRIMER_RIGHT_TM | 59.989 |
| PRIMER_LEFT_LENGTH | 20 | PRIMER_RIGHT_LENGTH | 20 |
| PRIMER_LEFT_SELF_ANY | 6.00 | PRIMER_RIGHT_SELF_ANY | 4.00 |
| Oligo 2 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_1 | 186 | ||
| PRIMER_PAIR_PENALTY_1 | 0.3411 | ||
| PRIMER_PAIR_1_COMPL_END | 2.00 | ||
| PRIMER_PAIR_1_COMPL_ANY | 5.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_1_TM | 60.289 | PRIMER_RIGHT_1_TM | 59.948 |
| PRIMER_LEFT_1_END_STABILITY | 11.2000 | PRIMER_RIGHT_1_END_STABILITY | 9.9000 |
| PRIMER_LEFT_1_GC_PERCENT | 50.000 | PRIMER_RIGHT_1_GC_PERCENT | 50.000 |
| PRIMER_LEFT_1_SEQUENCE | GGACATCATGAGAAATGCCC | PRIMER_RIGHT_1_SEQUENCE | CTTCTCTTTGGCAATCTCGG |
| PRIMER_LEFT_1_SELF_ANY | 6.00 | PRIMER_RIGHT_1_SELF_ANY | 5.00 |
| PRIMER_LEFT_1 | 381,20 | PRIMER_RIGHT_1 | 566,20 |
| PRIMER_LEFT_1_SELF_END | 1.00 | PRIMER_RIGHT_1_SELF_END | 1.00 |
| PRIMER_LEFT_1_PENALTY | 0.289438 | PRIMER_RIGHT_1_PENALTY | 0.051674 |
| Oligo 3 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_2 | 187 | ||
| PRIMER_PAIR_2_COMPL_ANY | 5.00 | ||
| PRIMER_PAIR_2_COMPL_END | 3.00 | ||
| PRIMER_PAIR_PENALTY_2 | 0.3411 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_2_END_STABILITY | 11.2000 | PRIMER_RIGHT_2_END_STABILITY | 8.4000 |
| PRIMER_LEFT_2_SEQUENCE | GGACATCATGAGAAATGCCC | PRIMER_RIGHT_2_SEQUENCE | CCTTCTCTTTGGCAATCTCG |
| PRIMER_LEFT_2_SELF_END | 1.00 | PRIMER_RIGHT_2_SELF_END | 2.00 |
| PRIMER_LEFT_2 | 381,20 | PRIMER_RIGHT_2 | 567,20 |
| PRIMER_LEFT_2_TM | 60.289 | PRIMER_RIGHT_2_TM | 59.948 |
| PRIMER_LEFT_2_GC_PERCENT | 50.000 | PRIMER_RIGHT_2_GC_PERCENT | 50.000 |
| PRIMER_LEFT_2_SELF_ANY | 6.00 | PRIMER_RIGHT_2_SELF_ANY | 5.00 |
| PRIMER_LEFT_2_PENALTY | 0.289438 | PRIMER_RIGHT_2_PENALTY | 0.051674 |
| Oligo 4 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_3 | 176 | ||
| PRIMER_PAIR_PENALTY_3 | 0.3798 | ||
| PRIMER_PAIR_3_COMPL_ANY | 4.00 | ||
| PRIMER_PAIR_3_COMPL_END | 3.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_3_PENALTY | 0.369208 | PRIMER_RIGHT_3_PENALTY | 0.010545 |
| PRIMER_LEFT_3_SELF_END | 0.00 | PRIMER_RIGHT_3_SELF_END | 0.00 |
| PRIMER_LEFT_3_END_STABILITY | 6.7000 | PRIMER_RIGHT_3_END_STABILITY | 8.2000 |
| PRIMER_LEFT_3_GC_PERCENT | 50.000 | PRIMER_RIGHT_3_GC_PERCENT | 50.000 |
| PRIMER_LEFT_3_TM | 59.631 | PRIMER_RIGHT_3_TM | 59.989 |
| PRIMER_LEFT_3_SELF_ANY | 6.00 | PRIMER_RIGHT_3_SELF_ANY | 4.00 |
| PRIMER_LEFT_3_SEQUENCE | CCACTCGGACATCATGAGAA | PRIMER_RIGHT_3_SEQUENCE | TCGGCTGACTCTTCTTTGGT |
| PRIMER_LEFT_3 | 375,20 | PRIMER_RIGHT_3 | 550,20 |
| Oligo 5 | |||
|---|---|---|---|
| PRIMER_PAIR_4_COMPL_ANY | 5.00 | ||
| PRIMER_PRODUCT_SIZE_4 | 270 | ||
| PRIMER_PAIR_4_COMPL_END | 1.00 | ||
| PRIMER_PAIR_PENALTY_4 | 0.3913 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_4_SEQUENCE | AACATTGCCAGCTGTTCCTC | PRIMER_RIGHT_4_SEQUENCE | GAGTGGCACAGTCACCTGAA |
| PRIMER_LEFT_4_SELF_END | 0.00 | PRIMER_RIGHT_4_SELF_END | 2.00 |
| PRIMER_LEFT_4_TM | 60.263 | PRIMER_RIGHT_4_TM | 59.872 |
| PRIMER_LEFT_4_PENALTY | 0.262854 | PRIMER_RIGHT_4_PENALTY | 0.128480 |
| PRIMER_LEFT_4 | 111,20 | PRIMER_RIGHT_4 | 380,20 |
| PRIMER_LEFT_4_END_STABILITY | 7.9000 | PRIMER_RIGHT_4_END_STABILITY | 7.0000 |
| PRIMER_LEFT_4_GC_PERCENT | 50.000 | PRIMER_RIGHT_4_GC_PERCENT | 55.000 |
| PRIMER_LEFT_4_SELF_ANY | 6.00 | PRIMER_RIGHT_4_SELF_ANY | 5.00 |
| Sequence |
|---|
TTCGCTAGGACAAAAGCCATTGCTAACACGAAGGTCTCAACATCGAGACTACTGGCGAATGTGATGCAGCTCCTTCAAAGGTGTGCCTATTGTTTATTCA
CCTACAGAGGATGAAAATATCTTAGTTTTGAACACTCTATAACAATATTGGCATTGTAGGCACGAGTTCCTTCAAAATCATGGGGATTGGATCAACACAG
TGAAGCCAGCCATTGATCCTGTGATTTTATCACAAGTGTGTGAGAACCCAGAACTAACCAATGAAGAGACTGAGAACCTGAATGCTATCAGAAACGAGAC
TCGAGTGGCTATTGGTTCACTTCTCAAGGTATTCCTGCTCTTCCATGACATGTCCACAACTTGAGCGAGTTAGTTTATATGTCTCTTGACTAATCTCTAA
TGGTTCCCAACTCTGTAACGTTATGTATCAAGGATGATGGCATTCTGGTAATTCCAACATTGCCAGCTGTTCCTCCAAAACTTGGTAGCAAGGAGATAAC
ATCTGAAGACTATCAAAACCGAGCTTCAAGTCTGCTTAGCATTGCTAGCATATCAGGATGTTGTCAGGTTAAATCTCTCTCTTTCTCTCTCTCACCTGCC
AT |
| Oligo 1 | |||
|---|---|---|---|
| PRIMER_PAIR_COMPL_ANY | 4.00 | ||
| PRIMER_PRODUCT_SIZE | 179 | ||
| PRIMER_PAIR_PENALTY | 0.1876 | ||
| PRIMER_PAIR_COMPL_END | 0.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_GC_PERCENT | 50.000 | PRIMER_RIGHT_GC_PERCENT | 40.000 |
| PRIMER_LEFT_POSITION | 15 | PRIMER_RIGHT_POSITION | 193 |
| PRIMER_LEFT_PENALTY | 0.139753 | PRIMER_RIGHT_PENALTY | 0.047806 |
| PRIMER_LEFT_SELF_END | 0.00 | PRIMER_RIGHT_SELF_END | 1.00 |
| PRIMER_LEFT_SEQUENCE | GCCATTGCTAACACGAAGGT | PRIMER_RIGHT_SEQUENCE | TGATCCAATCCCCATGATTT |
| PRIMER_LEFT_END_STABILITY | 7.9000 | PRIMER_RIGHT_END_STABILITY | 6.9000 |
| PRIMER_LEFT_TM | 60.140 | PRIMER_RIGHT_TM | 59.952 |
| PRIMER_LEFT_LENGTH | 20 | PRIMER_RIGHT_LENGTH | 20 |
| PRIMER_LEFT_SELF_ANY | 4.00 | PRIMER_RIGHT_SELF_ANY | 4.00 |
| Oligo 2 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_1 | 180 | ||
| PRIMER_PAIR_PENALTY_1 | 0.1876 | ||
| PRIMER_PAIR_1_COMPL_END | 1.00 | ||
| PRIMER_PAIR_1_COMPL_ANY | 4.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_1_TM | 60.140 | PRIMER_RIGHT_1_TM | 59.952 |
| PRIMER_LEFT_1_END_STABILITY | 7.9000 | PRIMER_RIGHT_1_END_STABILITY | 6.9000 |
| PRIMER_LEFT_1_GC_PERCENT | 50.000 | PRIMER_RIGHT_1_GC_PERCENT | 40.000 |
| PRIMER_LEFT_1_SEQUENCE | GCCATTGCTAACACGAAGGT | PRIMER_RIGHT_1_SEQUENCE | TTGATCCAATCCCCATGATT |
| PRIMER_LEFT_1_SELF_ANY | 4.00 | PRIMER_RIGHT_1_SELF_ANY | 4.00 |
| PRIMER_LEFT_1 | 15,20 | PRIMER_RIGHT_1 | 194,20 |
| PRIMER_LEFT_1_SELF_END | 0.00 | PRIMER_RIGHT_1_SELF_END | 3.00 |
| PRIMER_LEFT_1_PENALTY | 0.139753 | PRIMER_RIGHT_1_PENALTY | 0.047806 |
| Oligo 3 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_2 | 193 | ||
| PRIMER_PAIR_2_COMPL_ANY | 3.00 | ||
| PRIMER_PAIR_2_COMPL_END | 2.00 | ||
| PRIMER_PAIR_PENALTY_2 | 0.2027 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_2_END_STABILITY | 8.4000 | PRIMER_RIGHT_2_END_STABILITY | 6.9000 |
| PRIMER_LEFT_2_SEQUENCE | TCGCTAGGACAAAAGCCATT | PRIMER_RIGHT_2_SEQUENCE | TGATCCAATCCCCATGATTT |
| PRIMER_LEFT_2_SELF_END | 3.00 | PRIMER_RIGHT_2_SELF_END | 1.00 |
| PRIMER_LEFT_2 | 1,20 | PRIMER_RIGHT_2 | 193,20 |
| PRIMER_LEFT_2_TM | 59.845 | PRIMER_RIGHT_2_TM | 59.952 |
| PRIMER_LEFT_2_GC_PERCENT | 45.000 | PRIMER_RIGHT_2_GC_PERCENT | 40.000 |
| PRIMER_LEFT_2_SELF_ANY | 4.00 | PRIMER_RIGHT_2_SELF_ANY | 4.00 |
| PRIMER_LEFT_2_PENALTY | 0.154878 | PRIMER_RIGHT_2_PENALTY | 0.047806 |
| Oligo 4 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_3 | 194 | ||
| PRIMER_PAIR_PENALTY_3 | 0.2027 | ||
| PRIMER_PAIR_3_COMPL_ANY | 3.00 | ||
| PRIMER_PAIR_3_COMPL_END | 3.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_3_PENALTY | 0.154878 | PRIMER_RIGHT_3_PENALTY | 0.047806 |
| PRIMER_LEFT_3_SELF_END | 2.00 | PRIMER_RIGHT_3_SELF_END | 1.00 |
| PRIMER_LEFT_3_END_STABILITY | 9.6000 | PRIMER_RIGHT_3_END_STABILITY | 6.9000 |
| PRIMER_LEFT_3_GC_PERCENT | 45.000 | PRIMER_RIGHT_3_GC_PERCENT | 40.000 |
| PRIMER_LEFT_3_TM | 59.845 | PRIMER_RIGHT_3_TM | 59.952 |
| PRIMER_LEFT_3_SELF_ANY | 4.00 | PRIMER_RIGHT_3_SELF_ANY | 4.00 |
| PRIMER_LEFT_3_SEQUENCE | TTCGCTAGGACAAAAGCCAT | PRIMER_RIGHT_3_SEQUENCE | TGATCCAATCCCCATGATTT |
| PRIMER_LEFT_3 | 0,20 | PRIMER_RIGHT_3 | 193,20 |
| Oligo 5 | |||
|---|---|---|---|
| PRIMER_PAIR_4_COMPL_ANY | 4.00 | ||
| PRIMER_PRODUCT_SIZE_4 | 194 | ||
| PRIMER_PAIR_4_COMPL_END | 1.00 | ||
| PRIMER_PAIR_PENALTY_4 | 0.2027 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_4_SEQUENCE | TCGCTAGGACAAAAGCCATT | PRIMER_RIGHT_4_SEQUENCE | TTGATCCAATCCCCATGATT |
| PRIMER_LEFT_4_SELF_END | 3.00 | PRIMER_RIGHT_4_SELF_END | 3.00 |
| PRIMER_LEFT_4_TM | 59.845 | PRIMER_RIGHT_4_TM | 59.952 |
| PRIMER_LEFT_4_PENALTY | 0.154878 | PRIMER_RIGHT_4_PENALTY | 0.047806 |
| PRIMER_LEFT_4 | 1,20 | PRIMER_RIGHT_4 | 194,20 |
| PRIMER_LEFT_4_END_STABILITY | 8.4000 | PRIMER_RIGHT_4_END_STABILITY | 6.9000 |
| PRIMER_LEFT_4_GC_PERCENT | 45.000 | PRIMER_RIGHT_4_GC_PERCENT | 40.000 |
| PRIMER_LEFT_4_SELF_ANY | 4.00 | PRIMER_RIGHT_4_SELF_ANY | 4.00 |
| Sequence |
|---|
AATTTTTTGTTTTACAACGTGAATAAAAAACTGTTGACAAAACGAAAATAAAATAAACCCTCGAGTGATGTTAAAAAAAGGAAGAAGGAAAAAGAATAAA
AACTCAAAGGGAACGCAACACACTAAACAAAAACTCTTTGGCGTCCTTCTCCTTAGGGTCTATCTCTCTTATCTTAAGCAGCAGCAGCAGCAGCTAGAAC
AAAAACGTCACCGATGGCGTCTCAAGCTGCGAATCTCTGGGTTCTTCTAGGTTTAGGTCTCGCTGGGATTCTTATGCTTACCAAAAAGCTGAAGAAGACC
GTCCGTGAAGATTTCGGCGCTTTTATCGATAAACTCATGCTTCTTCCCCCTCCGCAACCTGCTCCTCCCAAAGCTCCTCATCCTCTCACCGGTCTAACCT
TTGCCGTTTCCGACGTGTGAGTCTCCGTTGACTTGTTTCCCCCTTTCTTCTCCCATATGTTTATCATATCTATATTTGGGGGTTTAGCTGAATGATTTTT
TCCTTGGGTAGAGTCAAAATTTTGTTTGACAAATGTTGGAATCTGCGTTGACTCGACTCGTAATCTTCTCCGGCGCACTACATGTCTGATTCTGAGCTTT
CG |
| Oligo 1 | |||
|---|---|---|---|
| PRIMER_PAIR_COMPL_ANY | 3.00 | ||
| PRIMER_PRODUCT_SIZE | 163 | ||
| PRIMER_PAIR_PENALTY | 0.1424 | ||
| PRIMER_PAIR_COMPL_END | 1.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_GC_PERCENT | 50.000 | PRIMER_RIGHT_GC_PERCENT | 45.000 |
| PRIMER_LEFT_POSITION | 331 | PRIMER_RIGHT_POSITION | 493 |
| PRIMER_LEFT_PENALTY | 0.073866 | PRIMER_RIGHT_PENALTY | 0.068521 |
| PRIMER_LEFT_SELF_END | 0.00 | PRIMER_RIGHT_SELF_END | 0.00 |
| PRIMER_LEFT_SEQUENCE | AACTCATGCTTCTTCCCCCT | PRIMER_RIGHT_SEQUENCE | CATTCAGCTAAACCCCCAAA |
| PRIMER_LEFT_END_STABILITY | 10.9000 | PRIMER_RIGHT_END_STABILITY | 8.8000 |
| PRIMER_LEFT_TM | 60.074 | PRIMER_RIGHT_TM | 59.931 |
| PRIMER_LEFT_LENGTH | 20 | PRIMER_RIGHT_LENGTH | 20 |
| PRIMER_LEFT_SELF_ANY | 4.00 | PRIMER_RIGHT_SELF_ANY | 6.00 |
| Oligo 2 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_1 | 110 | ||
| PRIMER_PAIR_PENALTY_1 | 0.1622 | ||
| PRIMER_PAIR_1_COMPL_END | 3.00 | ||
| PRIMER_PAIR_1_COMPL_ANY | 6.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_1_TM | 60.074 | PRIMER_RIGHT_1_TM | 60.088 |
| PRIMER_LEFT_1_END_STABILITY | 10.9000 | PRIMER_RIGHT_1_END_STABILITY | 7.9000 |
| PRIMER_LEFT_1_GC_PERCENT | 50.000 | PRIMER_RIGHT_1_GC_PERCENT | 50.000 |
| PRIMER_LEFT_1_SEQUENCE | AACTCATGCTTCTTCCCCCT | PRIMER_RIGHT_1_SEQUENCE | GGGAAACAAGTCAACGGAGA |
| PRIMER_LEFT_1_SELF_ANY | 4.00 | PRIMER_RIGHT_1_SELF_ANY | 2.00 |
| PRIMER_LEFT_1 | 331,20 | PRIMER_RIGHT_1 | 440,20 |
| PRIMER_LEFT_1_SELF_END | 0.00 | PRIMER_RIGHT_1_SELF_END | 2.00 |
| PRIMER_LEFT_1_PENALTY | 0.073866 | PRIMER_RIGHT_1_PENALTY | 0.088296 |
| Oligo 3 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_2 | 100 | ||
| PRIMER_PAIR_2_COMPL_ANY | 3.00 | ||
| PRIMER_PAIR_2_COMPL_END | 0.00 | ||
| PRIMER_PAIR_PENALTY_2 | 0.2023 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_2_END_STABILITY | 10.9000 | PRIMER_RIGHT_2_END_STABILITY | 7.8000 |
| PRIMER_LEFT_2_SEQUENCE | AACTCATGCTTCTTCCCCCT | PRIMER_RIGHT_2_SEQUENCE | TCAACGGAGACTCACACGTC |
| PRIMER_LEFT_2_SELF_END | 0.00 | PRIMER_RIGHT_2_SELF_END | 3.00 |
| PRIMER_LEFT_2 | 331,20 | PRIMER_RIGHT_2 | 430,20 |
| PRIMER_LEFT_2_TM | 60.074 | PRIMER_RIGHT_2_TM | 59.872 |
| PRIMER_LEFT_2_GC_PERCENT | 50.000 | PRIMER_RIGHT_2_GC_PERCENT | 55.000 |
| PRIMER_LEFT_2_SELF_ANY | 4.00 | PRIMER_RIGHT_2_SELF_ANY | 5.00 |
| PRIMER_LEFT_2_PENALTY | 0.073866 | PRIMER_RIGHT_2_PENALTY | 0.128480 |
| Oligo 4 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_3 | 203 | ||
| PRIMER_PAIR_PENALTY_3 | 0.2246 | ||
| PRIMER_PAIR_3_COMPL_ANY | 4.00 | ||
| PRIMER_PAIR_3_COMPL_END | 0.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_3_PENALTY | 0.156061 | PRIMER_RIGHT_3_PENALTY | 0.068521 |
| PRIMER_LEFT_3_SELF_END | 0.00 | PRIMER_RIGHT_3_SELF_END | 0.00 |
| PRIMER_LEFT_3_END_STABILITY | 6.7000 | PRIMER_RIGHT_3_END_STABILITY | 8.8000 |
| PRIMER_LEFT_3_GC_PERCENT | 50.000 | PRIMER_RIGHT_3_GC_PERCENT | 45.000 |
| PRIMER_LEFT_3_TM | 59.844 | PRIMER_RIGHT_3_TM | 59.931 |
| PRIMER_LEFT_3_SELF_ANY | 5.00 | PRIMER_RIGHT_3_SELF_ANY | 6.00 |
| PRIMER_LEFT_3_SEQUENCE | AAGAAGACCGTCCGTGAAGA | PRIMER_RIGHT_3_SEQUENCE | CATTCAGCTAAACCCCCAAA |
| PRIMER_LEFT_3 | 291,20 | PRIMER_RIGHT_3 | 493,20 |
| Oligo 5 | |||
|---|---|---|---|
| PRIMER_PAIR_4_COMPL_ANY | 4.00 | ||
| PRIMER_PRODUCT_SIZE_4 | 204 | ||
| PRIMER_PAIR_4_COMPL_END | 0.00 | ||
| PRIMER_PAIR_PENALTY_4 | 0.2246 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_4_SEQUENCE | GAAGAAGACCGTCCGTGAAG | PRIMER_RIGHT_4_SEQUENCE | CATTCAGCTAAACCCCCAAA |
| PRIMER_LEFT_4_SELF_END | 2.00 | PRIMER_RIGHT_4_SELF_END | 0.00 |
| PRIMER_LEFT_4_TM | 59.844 | PRIMER_RIGHT_4_TM | 59.931 |
| PRIMER_LEFT_4_PENALTY | 0.156061 | PRIMER_RIGHT_4_PENALTY | 0.068521 |
| PRIMER_LEFT_4 | 290,20 | PRIMER_RIGHT_4 | 493,20 |
| PRIMER_LEFT_4_END_STABILITY | 7.0000 | PRIMER_RIGHT_4_END_STABILITY | 8.8000 |
| PRIMER_LEFT_4_GC_PERCENT | 55.000 | PRIMER_RIGHT_4_GC_PERCENT | 45.000 |
| PRIMER_LEFT_4_SELF_ANY | 5.00 | PRIMER_RIGHT_4_SELF_ANY | 6.00 |
| Sequence |
|---|
TTAATAAAATTAATTTTTTGTTTTACAACGTGAATAAAAAACTGTTGACAAAACGAAAATAAAATAAACCCTCGAGTGATGTTAAAAAAAGGAAGAAGGA
AAAAGAATAAAAACTCAAAGGGAACGCAACACACTAAACAAAAACTCTTTGGCGTCCTTCTCCTTAGGGTCTATCTCTCTTATCTTAAGCAGCAGCAGCA
GCAGCTAGAACAAAAACGTCACCGATGGCGTCTCAAGCTGCGAATCTCTGGGTTCTTCTAGGTTTAGGTCTCGCTGGGATTCTTATGCTTACCAAAAAGC
TGAAGAAGACCGTCCGTGAAGATTTCGGCGCTTTTATCGATAAACTCATGCTTCTTCCCCCTCCGCAACCTGCTCCTCCCAAAGCTCCTCATCCTCTCAC
CGGTCTAACCTTTGCCGTTTCCGACGTGTGAGTCTCCGTTGACTTGTTTCCCCCTTTCTTCTCCCATATGTTTATCATATCTATATTTGGGGGTTTAGCT
GAATGATTTTTTCCTTGGGTAGAGTCAAAATTTTGTTTGACAAATGTTGGAATCTGCGTTGACTCGACTCGTAATCTTCTCCGGCGCACTACATGTCTGA
TT |
| Oligo 1 | |||
|---|---|---|---|
| PRIMER_PAIR_COMPL_ANY | 3.00 | ||
| PRIMER_PRODUCT_SIZE | 163 | ||
| PRIMER_PAIR_PENALTY | 0.1424 | ||
| PRIMER_PAIR_COMPL_END | 1.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_GC_PERCENT | 50.000 | PRIMER_RIGHT_GC_PERCENT | 45.000 |
| PRIMER_LEFT_POSITION | 342 | PRIMER_RIGHT_POSITION | 504 |
| PRIMER_LEFT_PENALTY | 0.073866 | PRIMER_RIGHT_PENALTY | 0.068521 |
| PRIMER_LEFT_SELF_END | 0.00 | PRIMER_RIGHT_SELF_END | 0.00 |
| PRIMER_LEFT_SEQUENCE | AACTCATGCTTCTTCCCCCT | PRIMER_RIGHT_SEQUENCE | CATTCAGCTAAACCCCCAAA |
| PRIMER_LEFT_END_STABILITY | 10.9000 | PRIMER_RIGHT_END_STABILITY | 8.8000 |
| PRIMER_LEFT_TM | 60.074 | PRIMER_RIGHT_TM | 59.931 |
| PRIMER_LEFT_LENGTH | 20 | PRIMER_RIGHT_LENGTH | 20 |
| PRIMER_LEFT_SELF_ANY | 4.00 | PRIMER_RIGHT_SELF_ANY | 6.00 |
| Oligo 2 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_1 | 110 | ||
| PRIMER_PAIR_PENALTY_1 | 0.1622 | ||
| PRIMER_PAIR_1_COMPL_END | 3.00 | ||
| PRIMER_PAIR_1_COMPL_ANY | 6.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_1_TM | 60.074 | PRIMER_RIGHT_1_TM | 60.088 |
| PRIMER_LEFT_1_END_STABILITY | 10.9000 | PRIMER_RIGHT_1_END_STABILITY | 7.9000 |
| PRIMER_LEFT_1_GC_PERCENT | 50.000 | PRIMER_RIGHT_1_GC_PERCENT | 50.000 |
| PRIMER_LEFT_1_SEQUENCE | AACTCATGCTTCTTCCCCCT | PRIMER_RIGHT_1_SEQUENCE | GGGAAACAAGTCAACGGAGA |
| PRIMER_LEFT_1_SELF_ANY | 4.00 | PRIMER_RIGHT_1_SELF_ANY | 2.00 |
| PRIMER_LEFT_1 | 342,20 | PRIMER_RIGHT_1 | 451,20 |
| PRIMER_LEFT_1_SELF_END | 0.00 | PRIMER_RIGHT_1_SELF_END | 2.00 |
| PRIMER_LEFT_1_PENALTY | 0.073866 | PRIMER_RIGHT_1_PENALTY | 0.088296 |
| Oligo 3 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_2 | 100 | ||
| PRIMER_PAIR_2_COMPL_ANY | 3.00 | ||
| PRIMER_PAIR_2_COMPL_END | 0.00 | ||
| PRIMER_PAIR_PENALTY_2 | 0.2023 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_2_END_STABILITY | 10.9000 | PRIMER_RIGHT_2_END_STABILITY | 7.8000 |
| PRIMER_LEFT_2_SEQUENCE | AACTCATGCTTCTTCCCCCT | PRIMER_RIGHT_2_SEQUENCE | TCAACGGAGACTCACACGTC |
| PRIMER_LEFT_2_SELF_END | 0.00 | PRIMER_RIGHT_2_SELF_END | 3.00 |
| PRIMER_LEFT_2 | 342,20 | PRIMER_RIGHT_2 | 441,20 |
| PRIMER_LEFT_2_TM | 60.074 | PRIMER_RIGHT_2_TM | 59.872 |
| PRIMER_LEFT_2_GC_PERCENT | 50.000 | PRIMER_RIGHT_2_GC_PERCENT | 55.000 |
| PRIMER_LEFT_2_SELF_ANY | 4.00 | PRIMER_RIGHT_2_SELF_ANY | 5.00 |
| PRIMER_LEFT_2_PENALTY | 0.073866 | PRIMER_RIGHT_2_PENALTY | 0.128480 |
| Oligo 4 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_3 | 203 | ||
| PRIMER_PAIR_PENALTY_3 | 0.2246 | ||
| PRIMER_PAIR_3_COMPL_ANY | 4.00 | ||
| PRIMER_PAIR_3_COMPL_END | 0.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_3_PENALTY | 0.156061 | PRIMER_RIGHT_3_PENALTY | 0.068521 |
| PRIMER_LEFT_3_SELF_END | 0.00 | PRIMER_RIGHT_3_SELF_END | 0.00 |
| PRIMER_LEFT_3_END_STABILITY | 6.7000 | PRIMER_RIGHT_3_END_STABILITY | 8.8000 |
| PRIMER_LEFT_3_GC_PERCENT | 50.000 | PRIMER_RIGHT_3_GC_PERCENT | 45.000 |
| PRIMER_LEFT_3_TM | 59.844 | PRIMER_RIGHT_3_TM | 59.931 |
| PRIMER_LEFT_3_SELF_ANY | 5.00 | PRIMER_RIGHT_3_SELF_ANY | 6.00 |
| PRIMER_LEFT_3_SEQUENCE | AAGAAGACCGTCCGTGAAGA | PRIMER_RIGHT_3_SEQUENCE | CATTCAGCTAAACCCCCAAA |
| PRIMER_LEFT_3 | 302,20 | PRIMER_RIGHT_3 | 504,20 |
| Oligo 5 | |||
|---|---|---|---|
| PRIMER_PAIR_4_COMPL_ANY | 4.00 | ||
| PRIMER_PRODUCT_SIZE_4 | 204 | ||
| PRIMER_PAIR_4_COMPL_END | 0.00 | ||
| PRIMER_PAIR_PENALTY_4 | 0.2246 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_4_SEQUENCE | GAAGAAGACCGTCCGTGAAG | PRIMER_RIGHT_4_SEQUENCE | CATTCAGCTAAACCCCCAAA |
| PRIMER_LEFT_4_SELF_END | 2.00 | PRIMER_RIGHT_4_SELF_END | 0.00 |
| PRIMER_LEFT_4_TM | 59.844 | PRIMER_RIGHT_4_TM | 59.931 |
| PRIMER_LEFT_4_PENALTY | 0.156061 | PRIMER_RIGHT_4_PENALTY | 0.068521 |
| PRIMER_LEFT_4 | 301,20 | PRIMER_RIGHT_4 | 504,20 |
| PRIMER_LEFT_4_END_STABILITY | 7.0000 | PRIMER_RIGHT_4_END_STABILITY | 8.8000 |
| PRIMER_LEFT_4_GC_PERCENT | 55.000 | PRIMER_RIGHT_4_GC_PERCENT | 45.000 |
| PRIMER_LEFT_4_SELF_ANY | 5.00 | PRIMER_RIGHT_4_SELF_ANY | 6.00 |
| Sequence |
|---|
TTAATAAAATTAATTTTTTGTTTTACAACGTGAATAAAAAACTGTTGACAAAACGAAAATAAAATAAACCCTCGAGTGATGTTAAAAAAAGGAAGAAGGA
AAAAGAATAAAAACTCAAAGGGAACGCAACACACTAAACAAAAACTCTTTGGCGTCCTTCTCCTTAGGGTCTATCTCTCTTATCTTAAGCAGCAGCAGCA
GCAGCTAGAACAAAAACGTCACCGATGGCGTCTCAAGCTGCGAATCTCTGGGTTCTTCTAGGTTTAGGTCTCGCTGGGATTCTTATGCTTACCAAAAAGC
TGAAGAAGACCGTCCGTGAAGATTTCGGCGCTTTTATCGATAAACTCATGCTTCTTCCCCCTCCGCAACCTGCTCCTCCCAAAGCTCCTCATCCTCTCAC
CGGTCTAACCTTTGCCGTTTCCGACGTGTGAGTCTCCGTTGACTTGTTTCCCCCTTTCTTCTCCCATATGTTTATCATATCTATATTTGGGGGTTTAGCT
GAATGATTTTTTCCTTGGGTAGAGTCAAAATTTTGTTTGACAAATGTTGGAATCTGCGTTGACTCGACTCGTAATCTTCTCCGGCGCACTACATGTCTGA
TT |
| Oligo 1 | |||
|---|---|---|---|
| PRIMER_PAIR_COMPL_ANY | 3.00 | ||
| PRIMER_PRODUCT_SIZE | 163 | ||
| PRIMER_PAIR_PENALTY | 0.1424 | ||
| PRIMER_PAIR_COMPL_END | 1.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_GC_PERCENT | 50.000 | PRIMER_RIGHT_GC_PERCENT | 45.000 |
| PRIMER_LEFT_POSITION | 342 | PRIMER_RIGHT_POSITION | 504 |
| PRIMER_LEFT_PENALTY | 0.073866 | PRIMER_RIGHT_PENALTY | 0.068521 |
| PRIMER_LEFT_SELF_END | 0.00 | PRIMER_RIGHT_SELF_END | 0.00 |
| PRIMER_LEFT_SEQUENCE | AACTCATGCTTCTTCCCCCT | PRIMER_RIGHT_SEQUENCE | CATTCAGCTAAACCCCCAAA |
| PRIMER_LEFT_END_STABILITY | 10.9000 | PRIMER_RIGHT_END_STABILITY | 8.8000 |
| PRIMER_LEFT_TM | 60.074 | PRIMER_RIGHT_TM | 59.931 |
| PRIMER_LEFT_LENGTH | 20 | PRIMER_RIGHT_LENGTH | 20 |
| PRIMER_LEFT_SELF_ANY | 4.00 | PRIMER_RIGHT_SELF_ANY | 6.00 |
| Oligo 2 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_1 | 110 | ||
| PRIMER_PAIR_PENALTY_1 | 0.1622 | ||
| PRIMER_PAIR_1_COMPL_END | 3.00 | ||
| PRIMER_PAIR_1_COMPL_ANY | 6.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_1_TM | 60.074 | PRIMER_RIGHT_1_TM | 60.088 |
| PRIMER_LEFT_1_END_STABILITY | 10.9000 | PRIMER_RIGHT_1_END_STABILITY | 7.9000 |
| PRIMER_LEFT_1_GC_PERCENT | 50.000 | PRIMER_RIGHT_1_GC_PERCENT | 50.000 |
| PRIMER_LEFT_1_SEQUENCE | AACTCATGCTTCTTCCCCCT | PRIMER_RIGHT_1_SEQUENCE | GGGAAACAAGTCAACGGAGA |
| PRIMER_LEFT_1_SELF_ANY | 4.00 | PRIMER_RIGHT_1_SELF_ANY | 2.00 |
| PRIMER_LEFT_1 | 342,20 | PRIMER_RIGHT_1 | 451,20 |
| PRIMER_LEFT_1_SELF_END | 0.00 | PRIMER_RIGHT_1_SELF_END | 2.00 |
| PRIMER_LEFT_1_PENALTY | 0.073866 | PRIMER_RIGHT_1_PENALTY | 0.088296 |
| Oligo 3 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_2 | 100 | ||
| PRIMER_PAIR_2_COMPL_ANY | 3.00 | ||
| PRIMER_PAIR_2_COMPL_END | 0.00 | ||
| PRIMER_PAIR_PENALTY_2 | 0.2023 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_2_END_STABILITY | 10.9000 | PRIMER_RIGHT_2_END_STABILITY | 7.8000 |
| PRIMER_LEFT_2_SEQUENCE | AACTCATGCTTCTTCCCCCT | PRIMER_RIGHT_2_SEQUENCE | TCAACGGAGACTCACACGTC |
| PRIMER_LEFT_2_SELF_END | 0.00 | PRIMER_RIGHT_2_SELF_END | 3.00 |
| PRIMER_LEFT_2 | 342,20 | PRIMER_RIGHT_2 | 441,20 |
| PRIMER_LEFT_2_TM | 60.074 | PRIMER_RIGHT_2_TM | 59.872 |
| PRIMER_LEFT_2_GC_PERCENT | 50.000 | PRIMER_RIGHT_2_GC_PERCENT | 55.000 |
| PRIMER_LEFT_2_SELF_ANY | 4.00 | PRIMER_RIGHT_2_SELF_ANY | 5.00 |
| PRIMER_LEFT_2_PENALTY | 0.073866 | PRIMER_RIGHT_2_PENALTY | 0.128480 |
| Oligo 4 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_3 | 203 | ||
| PRIMER_PAIR_PENALTY_3 | 0.2246 | ||
| PRIMER_PAIR_3_COMPL_ANY | 4.00 | ||
| PRIMER_PAIR_3_COMPL_END | 0.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_3_PENALTY | 0.156061 | PRIMER_RIGHT_3_PENALTY | 0.068521 |
| PRIMER_LEFT_3_SELF_END | 0.00 | PRIMER_RIGHT_3_SELF_END | 0.00 |
| PRIMER_LEFT_3_END_STABILITY | 6.7000 | PRIMER_RIGHT_3_END_STABILITY | 8.8000 |
| PRIMER_LEFT_3_GC_PERCENT | 50.000 | PRIMER_RIGHT_3_GC_PERCENT | 45.000 |
| PRIMER_LEFT_3_TM | 59.844 | PRIMER_RIGHT_3_TM | 59.931 |
| PRIMER_LEFT_3_SELF_ANY | 5.00 | PRIMER_RIGHT_3_SELF_ANY | 6.00 |
| PRIMER_LEFT_3_SEQUENCE | AAGAAGACCGTCCGTGAAGA | PRIMER_RIGHT_3_SEQUENCE | CATTCAGCTAAACCCCCAAA |
| PRIMER_LEFT_3 | 302,20 | PRIMER_RIGHT_3 | 504,20 |
| Oligo 5 | |||
|---|---|---|---|
| PRIMER_PAIR_4_COMPL_ANY | 4.00 | ||
| PRIMER_PRODUCT_SIZE_4 | 204 | ||
| PRIMER_PAIR_4_COMPL_END | 0.00 | ||
| PRIMER_PAIR_PENALTY_4 | 0.2246 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_4_SEQUENCE | GAAGAAGACCGTCCGTGAAG | PRIMER_RIGHT_4_SEQUENCE | CATTCAGCTAAACCCCCAAA |
| PRIMER_LEFT_4_SELF_END | 2.00 | PRIMER_RIGHT_4_SELF_END | 0.00 |
| PRIMER_LEFT_4_TM | 59.844 | PRIMER_RIGHT_4_TM | 59.931 |
| PRIMER_LEFT_4_PENALTY | 0.156061 | PRIMER_RIGHT_4_PENALTY | 0.068521 |
| PRIMER_LEFT_4 | 301,20 | PRIMER_RIGHT_4 | 504,20 |
| PRIMER_LEFT_4_END_STABILITY | 7.0000 | PRIMER_RIGHT_4_END_STABILITY | 8.8000 |
| PRIMER_LEFT_4_GC_PERCENT | 55.000 | PRIMER_RIGHT_4_GC_PERCENT | 45.000 |
| PRIMER_LEFT_4_SELF_ANY | 5.00 | PRIMER_RIGHT_4_SELF_ANY | 6.00 |
| Sequence |
|---|
TTAATAAAATTAATTTTTTGTTTTACAACGTGAATAAAAAACTGTTGACAAAACGAAAATAAAATAAACCCTCGAGTGATGTTAAAAAAAGGAAGAAGGA
AAAAGAATAAAAACTCAAAGGGAACGCAACACACTAAACAAAAACTCTTTGGCGTCCTTCTCCTTAGGGTCTATCTCTCTTATCTTAAGCAGCAGCAGCA
GCAGCTAGAACAAAAACGTCACCGATGGCGTCTCAAGCTGCGAATCTCTGGGTTCTTCTAGGTTTAGGTCTCGCTGGGATTCTTATGCTTACCAAAAAGC
TGAAGAAGACCGTCCGTGAAGATTTCGGCGCTTTTATCGATAAACTCATGCTTCTTCCCCCTCCGCAACCTGCTCCTCCCAAAGCTCCTCATCCTCTCAC
CGGTCTAACCTTTGCCGTTTCCGACGTGTGAGTCTCCGTTGACTTGTTTCCCCCTTTCTTCTCCCATATGTTTATCATATCTATATTTGGGGGTTTAGCT
GAATGATTTTTTCCTTGGGTAGAGTCAAAATTTTGTTTGACAAATGTTGGAATCTGCGTTGACTCGACTCGTAATCTTCTCCGGCGCACTACATGTCTGA
TT |
| Oligo 1 | |||
|---|---|---|---|
| PRIMER_PAIR_COMPL_ANY | 3.00 | ||
| PRIMER_PRODUCT_SIZE | 163 | ||
| PRIMER_PAIR_PENALTY | 0.1424 | ||
| PRIMER_PAIR_COMPL_END | 1.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_GC_PERCENT | 50.000 | PRIMER_RIGHT_GC_PERCENT | 45.000 |
| PRIMER_LEFT_POSITION | 342 | PRIMER_RIGHT_POSITION | 504 |
| PRIMER_LEFT_PENALTY | 0.073866 | PRIMER_RIGHT_PENALTY | 0.068521 |
| PRIMER_LEFT_SELF_END | 0.00 | PRIMER_RIGHT_SELF_END | 0.00 |
| PRIMER_LEFT_SEQUENCE | AACTCATGCTTCTTCCCCCT | PRIMER_RIGHT_SEQUENCE | CATTCAGCTAAACCCCCAAA |
| PRIMER_LEFT_END_STABILITY | 10.9000 | PRIMER_RIGHT_END_STABILITY | 8.8000 |
| PRIMER_LEFT_TM | 60.074 | PRIMER_RIGHT_TM | 59.931 |
| PRIMER_LEFT_LENGTH | 20 | PRIMER_RIGHT_LENGTH | 20 |
| PRIMER_LEFT_SELF_ANY | 4.00 | PRIMER_RIGHT_SELF_ANY | 6.00 |
| Oligo 2 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_1 | 110 | ||
| PRIMER_PAIR_PENALTY_1 | 0.1622 | ||
| PRIMER_PAIR_1_COMPL_END | 3.00 | ||
| PRIMER_PAIR_1_COMPL_ANY | 6.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_1_TM | 60.074 | PRIMER_RIGHT_1_TM | 60.088 |
| PRIMER_LEFT_1_END_STABILITY | 10.9000 | PRIMER_RIGHT_1_END_STABILITY | 7.9000 |
| PRIMER_LEFT_1_GC_PERCENT | 50.000 | PRIMER_RIGHT_1_GC_PERCENT | 50.000 |
| PRIMER_LEFT_1_SEQUENCE | AACTCATGCTTCTTCCCCCT | PRIMER_RIGHT_1_SEQUENCE | GGGAAACAAGTCAACGGAGA |
| PRIMER_LEFT_1_SELF_ANY | 4.00 | PRIMER_RIGHT_1_SELF_ANY | 2.00 |
| PRIMER_LEFT_1 | 342,20 | PRIMER_RIGHT_1 | 451,20 |
| PRIMER_LEFT_1_SELF_END | 0.00 | PRIMER_RIGHT_1_SELF_END | 2.00 |
| PRIMER_LEFT_1_PENALTY | 0.073866 | PRIMER_RIGHT_1_PENALTY | 0.088296 |
| Oligo 3 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_2 | 100 | ||
| PRIMER_PAIR_2_COMPL_ANY | 3.00 | ||
| PRIMER_PAIR_2_COMPL_END | 0.00 | ||
| PRIMER_PAIR_PENALTY_2 | 0.2023 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_2_END_STABILITY | 10.9000 | PRIMER_RIGHT_2_END_STABILITY | 7.8000 |
| PRIMER_LEFT_2_SEQUENCE | AACTCATGCTTCTTCCCCCT | PRIMER_RIGHT_2_SEQUENCE | TCAACGGAGACTCACACGTC |
| PRIMER_LEFT_2_SELF_END | 0.00 | PRIMER_RIGHT_2_SELF_END | 3.00 |
| PRIMER_LEFT_2 | 342,20 | PRIMER_RIGHT_2 | 441,20 |
| PRIMER_LEFT_2_TM | 60.074 | PRIMER_RIGHT_2_TM | 59.872 |
| PRIMER_LEFT_2_GC_PERCENT | 50.000 | PRIMER_RIGHT_2_GC_PERCENT | 55.000 |
| PRIMER_LEFT_2_SELF_ANY | 4.00 | PRIMER_RIGHT_2_SELF_ANY | 5.00 |
| PRIMER_LEFT_2_PENALTY | 0.073866 | PRIMER_RIGHT_2_PENALTY | 0.128480 |
| Oligo 4 | |||
|---|---|---|---|
| PRIMER_PRODUCT_SIZE_3 | 203 | ||
| PRIMER_PAIR_PENALTY_3 | 0.2246 | ||
| PRIMER_PAIR_3_COMPL_ANY | 4.00 | ||
| PRIMER_PAIR_3_COMPL_END | 0.00 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_3_PENALTY | 0.156061 | PRIMER_RIGHT_3_PENALTY | 0.068521 |
| PRIMER_LEFT_3_SELF_END | 0.00 | PRIMER_RIGHT_3_SELF_END | 0.00 |
| PRIMER_LEFT_3_END_STABILITY | 6.7000 | PRIMER_RIGHT_3_END_STABILITY | 8.8000 |
| PRIMER_LEFT_3_GC_PERCENT | 50.000 | PRIMER_RIGHT_3_GC_PERCENT | 45.000 |
| PRIMER_LEFT_3_TM | 59.844 | PRIMER_RIGHT_3_TM | 59.931 |
| PRIMER_LEFT_3_SELF_ANY | 5.00 | PRIMER_RIGHT_3_SELF_ANY | 6.00 |
| PRIMER_LEFT_3_SEQUENCE | AAGAAGACCGTCCGTGAAGA | PRIMER_RIGHT_3_SEQUENCE | CATTCAGCTAAACCCCCAAA |
| PRIMER_LEFT_3 | 302,20 | PRIMER_RIGHT_3 | 504,20 |
| Oligo 5 | |||
|---|---|---|---|
| PRIMER_PAIR_4_COMPL_ANY | 4.00 | ||
| PRIMER_PRODUCT_SIZE_4 | 204 | ||
| PRIMER_PAIR_4_COMPL_END | 0.00 | ||
| PRIMER_PAIR_PENALTY_4 | 0.2246 | ||
| Left Primer | Right Primer | ||
| PRIMER_LEFT_4_SEQUENCE | GAAGAAGACCGTCCGTGAAG | PRIMER_RIGHT_4_SEQUENCE | CATTCAGCTAAACCCCCAAA |
| PRIMER_LEFT_4_SELF_END | 2.00 | PRIMER_RIGHT_4_SELF_END | 0.00 |
| PRIMER_LEFT_4_TM | 59.844 | PRIMER_RIGHT_4_TM | 59.931 |
| PRIMER_LEFT_4_PENALTY | 0.156061 | PRIMER_RIGHT_4_PENALTY | 0.068521 |
| PRIMER_LEFT_4 | 301,20 | PRIMER_RIGHT_4 | 504,20 |
| PRIMER_LEFT_4_END_STABILITY | 7.0000 | PRIMER_RIGHT_4_END_STABILITY | 8.8000 |
| PRIMER_LEFT_4_GC_PERCENT | 55.000 | PRIMER_RIGHT_4_GC_PERCENT | 45.000 |
| PRIMER_LEFT_4_SELF_ANY | 5.00 | PRIMER_RIGHT_4_SELF_ANY | 6.00 |

