ATIDB : The Arabidopsis thaliana Integrated Database
Names and Synonyms
AT5G20410.1
MGD2
AT5G20410
F5O24.300
F5O24_300
AT5G20410
ATMGD2
Gene Ontology Terms
GO:0009707 [AMIGO Graph]
Term : cellular_component, chloroplast outer membrane
Definition : The outer, i.e. cytoplasm-facing, lipid bilayer of the chloroplast envelope.
GO:0016036 [AMIGO Graph]
Term : biological_process, cellular response to phosphate starvation
Definition : A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of phosphate.
GO:0019375 [AMIGO Graph]
Term : biological_process, galactolipid biosynthesis
Definition : The chemical reactions and pathways resulting in the formation of galactolipids, any glycolipid containing one of more residues of galactose and/or N-acetylgalactosamine.
GO:0046509 [AMIGO Graph]
Term : molecular_function, 1,2-diacylglycerol 3-beta-galactosyltransferase activity
Definition : Catalysis of the reaction: UDP-galactose + 1,2-diacylglycerol = UDP + 3-beta-D-galactosyl-1,2-diacylglycerol.
GO:0016757 [AMIGO Graph]
Term : molecular_function, transferase activity, transferring glycosyl groups
Definition : Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).
GO:0035250 [AMIGO Graph]
Term : molecular_function, UDP-galactosyltransferase activity
Definition : Catalysis of the transfer of a galactose group from UDP-galactose to an acceptor molecule.
GO:0009707 [AMIGO Graph]
Term : cellular_component, chloroplast outer membrane
Definition : The outer, i.e. cytoplasm-facing, lipid bilayer of the chloroplast envelope.
MIPS Functional Catalogue Classifications
| [01] |
METABOLISM |
| [01.06] |
lipid, fatty acid and isoprenoid metabolism |
Gene Predictions [*]
| Functional Class Prediction | Accuracy | (%age) | Predicted by rule |
|---|
Gene Insertions
Flanking Sequence : T-DNA_LB.GK-329E02-016035 [Graphical View|Text]
Location : chromosome 5, base 6898079-6898080
Mapping Score 5
[see FAQ]
Flanking Sequence : T-DNA_LB.GK-329E02-016044 [Graphical View|Text]
Location : chromosome 5, base 6898078-6898079
Mapping Score 5
[see FAQ]
Design Validation Primers
Automatically design primers for insert validation
InterProScan results
Sequences
AT5G20410.1 Sequences
AT5G20410.1, Protein sequence 468 amino acids
MATTVMALAEKVLERVYGTSKSAVSVTSGDGEKTHRHTHHHIHRIKSYDDIDEDESSLEL
IQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDKYRVIVKDVWKEYTGWPLNDM
ERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAIAAYYAKEVEAGLMEYKPEIIISVHPL
MQHIPLWVLKWQELQKRVLFVTVITDLNTCHPTWFHPGVNRCYCPSQEVAKRALFDGLDE
SQVRVFGLPVRPSFARAVLVKDDLRKELEMDQDLRAVLLMGGGEGMGPVKETAKALEEFL
YDKENRKPIGQMVVICGRNKKLASALEAIDWKIPVKVRGFETQMEKWMGACDCIITKAGP
GTIAESLIRSLPIILNDYIPGQEKGNVPYVVENGAGVFTRSPKETARIVGEWFSTKTDEL
EQTSDNARKLAQPEAVFDIVKDIDELSEQRGPLASVSYNLTSSFASLV*
AT5G20410.1 Sequence 2107 bases
CGGTGTCGAATCGCCGAGGGAAGGTGATTTTTCCGGGAAAGTCTCCGTTTTGTTTCACCTAATCATCTCAAAGACTCGTCCTTTATAAATGGCGACGACG
GTCATGGCCCTTGCAGAGAAAGTACTCGAAAGAGTTTACGGAACTTCCAAATCCGCCGTTTCCGTAACAAGCGGCGACGGCGAAAAGACTCACCGTCATA
CCCATCATCACATTCACCGTATCAAAAGCTACGACGACATCGACGAGGATGAATCATCATTGGAGCTTATCCAGATCGGTGCTGAGAGGACTAAGAACGT
CTTGATCCTCATGAGCGATACTGGTGGCGGTCACCGTGCTTCCGCTGAAGCCATTCGTGACGCTTTCAAGATCGAATTCGGAGACAAATATAGAGTAAAA
AGAACAATGCTGAGAAATTGTAGTTTATTCTCACCCTAAAAGGATTGGTTTTTGATTGAGAATTGTATGGTTTTGACAGGTAATTGTGAAGGATGTGTGG
AAGGAATACACAGGGTGGCCATTGAATGATATGGAGAGATCATATAAGTTCATGGTGAAGCATGTTCAGCTATGGAAAGTTGCTTTTCACAGCACATCAC
CCAAATGGATCCACTCTTGTTATCTAGCAGCCATTGCTGCTTATTACGCTAAGGAAGTAGAGGCTGGTTTAATGGAGTATAAGCCGGAGATAATCATTAG
TGTTCATCCTTTAATGCAACATATTCCATTGTGGGTTCTTAAATGGCAAGAGCTACAAAAGAGAGTCCTTTTTGTTACTGTCATTACTGATCTCAACACT
TGTCATCCTACTTGGTATATTTTATTAGCTTGGTTTAGACTTTGAGAGAAGAAGGTAGCTGCAAAGTTTGATTTTTTTAATCTTCTGTGGTTTAGGTTTC
ATCCGGGGGTGAATAGGTGCTATTGCCCGTCTCAAGAAGTGGCGAAAAGGGCGTTGTTTGATGGGCTTGATGAGTCTCAAGTCCGTGTCTTTGGTTTACC
TGTGAGGCCATCTTTTGCACGAGCGGTTTTGGTGAAGGATGATCTAAGAAAGGAGCTTGAGATGGATCAAGATCTTCGTGCGGTTCTACTGATGGGAGGA
GGGGAAGGTATGGGTCCTGTGAAAGAAACAGCTAAAGCTCTTGAGGAATTTTTGTATGATAAAGAGAACAGGAAGCCTATTGGGCAAATGGTTGTTATCT
GTGGACGTAACAAGAAATTGGCATCTGCATTAGAAGCCATTGACTGGAAGATTCCTGTTAAGGTATACATGATTTAAACAAACCCTTTTCCATTATTAGA
GGTTCATAAGATTCATGTTTCATGGATATTGACTTTATAGGTTCGAGGATTTGAGACTCAAATGGAGAAATGGATGGGAGCTTGTGACTGCATCATCACA
AAAGTGAGAGGAATTTGGTTTTTATGCCTACCTCTGTTAACCAAAATGTTCATAAAGCTAAATGTTCTACAAATCTTGCAGGCTGGACCAGGAACAATCG
CTGAATCGCTGATTCGATCACTTCCTATCATCCTCAACGATTACATTCCTGGACAGGTTGGTTGAGATCTGCATTTTTAATGTTTCCTGCTCATATATAT
ATATATGTATAATTCTCATATCAATTACACTTGAAACCAAACAGGAGAAAGGGAATGTGCCGTATGTAGTGGAGAATGGTGCAGGAGTATTCACAAGAAG
TCCCAAAGAGACAGCTAGAATCGTTGGGGAATGGTTTAGCACAAAGACAGATGAGTTGGAACAAACTTCAGACAATGCACGTAAACTAGCTCAGCCTGAG
GCAGTCTTCGACATTGTCAAAGACATTGATGAGCTCTCAGAGCAACGAGGTCCTCTTGCTAGCGTCTCTTACAATCTTACCTCTTCTTTTGCCAGTTTAG
TTTGATGTCCCATGTTTATATTAACATGTCTCCCTTAGTAGTTCTTTTGTCTGTTATTTTTTCCTTTCCTTATATTCCCTAATTTGTTTATTGATTGAAG
TTGTATGTATTATTTTTAAGCAAAAGGTTCATGATGTCTTTGCATTATTGTTAGCCATTAACAATATCAACAAGAGATTCTTGTTCATATAGAATCACAT
TACTATT
AT5G20410.1 Coding Sequence (CDS) 1404 bases
ATGGCGACGACGGTCATGGCCCTTGCAGAGAAAGTACTCGAAAGAGTTTACGGAACTTCCAAATCCGCCGTTTCCGTAACAAGCGGCGACGGCGAAAAGA
CTCACCGTCATACCCATCATCACATTCACCGTATCAAAAGCTACGACGACATCGACGAGGATGAATCATCATTGGAGCTTATCCAGATCGGTGCTGAGAG
GACTAAGAACGTCTTGATCCTCATGAGCGATACTGGTGGCGGTCACCGTGCTTCCGCTGAAGCCATTCGTGACGCTTTCAAGATCGAATTCGGAGACAAA
TATAGAGTAATTGTGAAGGATGTGTGGAAGGAATACACAGGGTGGCCATTGAATGATATGGAGAGATCATATAAGTTCATGGTGAAGCATGTTCAGCTAT
GGAAAGTTGCTTTTCACAGCACATCACCCAAATGGATCCACTCTTGTTATCTAGCAGCCATTGCTGCTTATTACGCTAAGGAAGTAGAGGCTGGTTTAAT
GGAGTATAAGCCGGAGATAATCATTAGTGTTCATCCTTTAATGCAACATATTCCATTGTGGGTTCTTAAATGGCAAGAGCTACAAAAGAGAGTCCTTTTT
GTTACTGTCATTACTGATCTCAACACTTGTCATCCTACTTGGTTTCATCCGGGGGTGAATAGGTGCTATTGCCCGTCTCAAGAAGTGGCGAAAAGGGCGT
TGTTTGATGGGCTTGATGAGTCTCAAGTCCGTGTCTTTGGTTTACCTGTGAGGCCATCTTTTGCACGAGCGGTTTTGGTGAAGGATGATCTAAGAAAGGA
GCTTGAGATGGATCAAGATCTTCGTGCGGTTCTACTGATGGGAGGAGGGGAAGGTATGGGTCCTGTGAAAGAAACAGCTAAAGCTCTTGAGGAATTTTTG
TATGATAAAGAGAACAGGAAGCCTATTGGGCAAATGGTTGTTATCTGTGGACGTAACAAGAAATTGGCATCTGCATTAGAAGCCATTGACTGGAAGATTC
CTGTTAAGGTTCGAGGATTTGAGACTCAAATGGAGAAATGGATGGGAGCTTGTGACTGCATCATCACAAAAGCTGGACCAGGAACAATCGCTGAATCGCT
GATTCGATCACTTCCTATCATCCTCAACGATTACATTCCTGGACAGGAGAAAGGGAATGTGCCGTATGTAGTGGAGAATGGTGCAGGAGTATTCACAAGA
AGTCCCAAAGAGACAGCTAGAATCGTTGGGGAATGGTTTAGCACAAAGACAGATGAGTTGGAACAAACTTCAGACAATGCACGTAAACTAGCTCAGCCTG
AGGCAGTCTTCGACATTGTCAAAGACATTGATGAGCTCTCAGAGCAACGAGGTCCTCTTGCTAGCGTCTCTTACAATCTTACCTCTTCTTTTGCCAGTTT
AGTTTGA
AT5G20410.1 cDNA Sequence 1697 bases
CGGTGTCGAATCGCCGAGGGAAGGTGATTTTTCCGGGAAAGTCTCCGTTTTGTTTCACCTAATCATCTCAAAGACTCGTCCTTTATAAATGGCGACGACG
GTCATGGCCCTTGCAGAGAAAGTACTCGAAAGAGTTTACGGAACTTCCAAATCCGCCGTTTCCGTAACAAGCGGCGACGGCGAAAAGACTCACCGTCATA
CCCATCATCACATTCACCGTATCAAAAGCTACGACGACATCGACGAGGATGAATCATCATTGGAGCTTATCCAGATCGGTGCTGAGAGGACTAAGAACGT
CTTGATCCTCATGAGCGATACTGGTGGCGGTCACCGTGCTTCCGCTGAAGCCATTCGTGACGCTTTCAAGATCGAATTCGGAGACAAATATAGAGTAATT
GTGAAGGATGTGTGGAAGGAATACACAGGGTGGCCATTGAATGATATGGAGAGATCATATAAGTTCATGGTGAAGCATGTTCAGCTATGGAAAGTTGCTT
TTCACAGCACATCACCCAAATGGATCCACTCTTGTTATCTAGCAGCCATTGCTGCTTATTACGCTAAGGAAGTAGAGGCTGGTTTAATGGAGTATAAGCC
GGAGATAATCATTAGTGTTCATCCTTTAATGCAACATATTCCATTGTGGGTTCTTAAATGGCAAGAGCTACAAAAGAGAGTCCTTTTTGTTACTGTCATT
ACTGATCTCAACACTTGTCATCCTACTTGGTTTCATCCGGGGGTGAATAGGTGCTATTGCCCGTCTCAAGAAGTGGCGAAAAGGGCGTTGTTTGATGGGC
TTGATGAGTCTCAAGTCCGTGTCTTTGGTTTACCTGTGAGGCCATCTTTTGCACGAGCGGTTTTGGTGAAGGATGATCTAAGAAAGGAGCTTGAGATGGA
TCAAGATCTTCGTGCGGTTCTACTGATGGGAGGAGGGGAAGGTATGGGTCCTGTGAAAGAAACAGCTAAAGCTCTTGAGGAATTTTTGTATGATAAAGAG
AACAGGAAGCCTATTGGGCAAATGGTTGTTATCTGTGGACGTAACAAGAAATTGGCATCTGCATTAGAAGCCATTGACTGGAAGATTCCTGTTAAGGTTC
GAGGATTTGAGACTCAAATGGAGAAATGGATGGGAGCTTGTGACTGCATCATCACAAAAGCTGGACCAGGAACAATCGCTGAATCGCTGATTCGATCACT
TCCTATCATCCTCAACGATTACATTCCTGGACAGGAGAAAGGGAATGTGCCGTATGTAGTGGAGAATGGTGCAGGAGTATTCACAAGAAGTCCCAAAGAG
ACAGCTAGAATCGTTGGGGAATGGTTTAGCACAAAGACAGATGAGTTGGAACAAACTTCAGACAATGCACGTAAACTAGCTCAGCCTGAGGCAGTCTTCG
ACATTGTCAAAGACATTGATGAGCTCTCAGAGCAACGAGGTCCTCTTGCTAGCGTCTCTTACAATCTTACCTCTTCTTTTGCCAGTTTAGTTTGATGTCC
CATGTTTATATTAACATGTCTCCCTTAGTAGTTCTTTTGTCTGTTATTTTTTCCTTTCCTTATATTCCCTAATTTGTTTATTGATTGAAGTTGTATGTAT
TATTTTTAAGCAAAAGGTTCATGATGTCTTTGCATTATTGTTAGCCATTAACAATATCAACAAGAGATTCTTGTTCATATAGAATCACATTACTATT