ATIDB : The Arabidopsis thaliana Integrated Database
Names and Synonyms
DGD2
AT4G00550.1
AT4G00550
DIGALACTOSYLDIACYLGLYCEROL SYNTHASE
F6N23.24
AT4G00550
F6N23.24
F6N23_24
Gene Ontology Terms
GO:0009247 [AMIGO Graph]
Term : biological_process, glycolipid biosynthesis
Definition : The chemical reactions and pathways resulting in the formation of glycolipid, a compound containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid.
GO:0008194 [AMIGO Graph]
Term : molecular_function, UDP-glycosyltransferase activity
Definition : Catalysis of the transfer of a glycosyl group from a UDP-sugar to a small hydrophobic molecule.
GO:0016036 [AMIGO Graph]
Term : biological_process, cellular response to phosphate starvation
Definition : A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of phosphate.
GO:0009707 [AMIGO Graph]
Term : cellular_component, chloroplast outer membrane
Definition : The outer, i.e. cytoplasm-facing, lipid bilayer of the chloroplast envelope.
GO:0035250 [AMIGO Graph]
Term : molecular_function, UDP-galactosyltransferase activity
Definition : Catalysis of the transfer of a galactose group from UDP-galactose to an acceptor molecule.
GO:0016036 [AMIGO Graph]
Term : biological_process, cellular response to phosphate starvation
Definition : A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of phosphate.
GO:0019375 [AMIGO Graph]
Term : biological_process, galactolipid biosynthesis
Definition : The chemical reactions and pathways resulting in the formation of galactolipids, any glycolipid containing one of more residues of galactose and/or N-acetylgalactosamine.
GO:0046481 [AMIGO Graph]
Term : molecular_function, UDP-galactose:MGDG galactosyltransferase activity
Definition : Catalysis of the reaction: 3-beta-D-galactosyl-1,2-diacylglycerol + UDP-galactose = alpha-D-galactosyl-beta-D-galactosyldiacylglycerol + UDP.
GO:0016757 [AMIGO Graph]
Term : molecular_function, transferase activity, transferring glycosyl groups
Definition : Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).
MIPS Functional Catalogue Classifications
| [99] |
UNCLASSIFIED PROTEINS |
Gene Predictions [*]
| Functional Class Prediction | Accuracy | (%age) | Predicted by rule |
|---|
| mfc:01.20 secondary metabolism |
40/52 |
76.92 |
[Scop mipsauto 2 - Rule43] |
Gene Insertions
Flanking Sequence : T-DNA_LB.SALK_066172 [Graphical View|Text]
Location : chromosome 4, base 240256-240257
Mapping Score 1
[see FAQ]
Flanking Sequence : T-DNA_LB.GK-048F03-016082 [Graphical View|Text]
Location : chromosome 4, base 239841-239842
Mapping Score 5
[see FAQ]
Flanking Sequence : T-DNA_LB.GK-048D03-016077 [Graphical View|Text]
Location : chromosome 4, base 239819-239820
Mapping Score 1
[see FAQ]
Flanking Sequence : T-DNA_LB.GK-048D03-016082 [Graphical View|Text]
Location : chromosome 4, base 239802-239803
Mapping Score 4
[see FAQ]
Flanking Sequence : T-DNA_LB.SALK_016885 [Graphical View|Text]
Location : chromosome 4, base 239505-239506
Mapping Score 5
[see FAQ]
Flanking Sequence : T-DNA_LB.SALK_030221.41.45.x [Graphical View|Text]
Location : chromosome 4, base 239420-239421
Mapping Score 6
[see FAQ]
Flanking Sequence : T-DNA_LB.SALK_030229.53.35.x [Graphical View|Text]
Location : chromosome 4, base 239420-239421
Mapping Score 5
[see FAQ]
Flanking Sequence : T-DNA_LB.SALK_030230.54.50.x [Graphical View|Text]
Location : chromosome 4, base 239386-239387
Mapping Score 3
[see FAQ]
Flanking Sequence : T-DNA_LB.GK-085H04-011845 [Graphical View|Text]
Location : chromosome 4, base 239359-239360
Mapping Score 5
[see FAQ]
Design Validation Primers
Automatically design primers for insert validation
InterProScan results
Sequences
AT4G00550.1 Sequences
AT4G00550.1, Protein sequence 473 amino acids
MTNQQEQHIAIFTTASIPWLTGTAVNPLFRAAYLANDGERRVTLVIPWLTLKHQKLVYPN
SITFSSPSEQEAYVRQWLEERVSFRLAFEIRFYPGKFAIDKRSILPVGDISDAIPDEEAD
IAVLEEPEHLTWFHHGQKWKTKFNYVIGIVHTNYLEYVKREKQGRVKAFFLKYLNSWVVG
IYCHKVIRLSAATQEYPKSIVCNVHGVNPKFLEIGLRKLEQQKLQEQPFTKGAYYIGKMV
WSKGYKELLKLLEKHQKELAELEVDLYGDGEDSEEIKEAARKLDLTVNVYPGRDHADSLF
HNYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHISNKFFKQFPNCRTYDDGQGFVRATL
KALGEQPSQLTEQQRHELSWEAATQRFIKVSDLNRLSRADSNLSKRSVFASSSISVGKNL
EDMSAYIHFLASGFEASRTAFGAIPGSLQPDEELCRDLGLSLNTPSPNTRKQD*
AT4G00550.1 Sequence 2534 bases
GATTCTTCTTCGTTCTAGACTTGGCGGAAAAAGAATGTTGGAGATTGGAGGATCCTGCGAAGACCAACCAGTCTGTTAATTTTGTATAAACAATGAAACG
AAGAAGATCTTCCGAGAATATTCTCTCCTTCTCACGCATACCCTAGAATATTGTTTCGTCTCTCTTCCTTCTACGTTTGCTTATTTGCCCCAACTCGACG
CGAATCATCAGCTTTTATAAATTCTGTCAACTCAAAGATTGTTTCTGAATTGGAATCTTACAGGTATGGCTTCATTTTTTTTTTTTTTTTTTTTTTTTGA
TGTAATCGAAAATCGCTTGAATCGTGTGAAAAGATTGTTTGAATTTGCAGAAAAATTAAGAATTTGTAGTCGAATGTTATCCTTATTGGGAAGATGCAAT
AATCAGATCAAACTCAATTACAAGAATCTATTGGTTTACTCTTTTTGTTTGATAATTTGTAGAGGTTTAGCTTGAGATGATATGACTAATCAGCAGGAGC
AACACATTGCGATATTTACAACAGCTAGTATTCCATGGCTTACGGGAACTGCTGTTAATCCTCTCTTCCGTGCTGCCTACCTTGCAAATGATGGGGAAAG
ACGGGTCACGTTGGTGATTCCATGGCTGACTTTGAAGCACCAAAAGCTTGTCTACCCAAATAGCATCACTTTTAGTTCCCCGTCAGAGCAAGAAGCTTAT
GTCCGCCAGTGGCTTGAGGAGAGAGTCTCTTTTCGTTTAGCCTTTGAGATACGTTTCTATCCTGGAAAGGTATGACTCTCAAGAATCTTCTTTTGGGTAC
CAAACACATACTGCTTCCTTTCATAGAGTCGATTGTTTCATTTCCGTGTGATATAGAGTTGAATTCTTCCATTTCTTTTACGTAGTACTCTGTGACTGTG
TTGTGCCAACCTTAGCAATTCAAATTTATCTTATGGCAGTTTGCTATTGACAAAAGGAGTATTCTTCCTGTTGGGGATATATCTGATGCCATTCCTGATG
AAGAGGCAGACATTGCTGTCCTCGAGGAGCCTGAGCATCTCACATGGTTTCATCATGGCCAAAAATGGAAAACTAAGTTCAACTACGTCATAGGAATCGT
ACACACTAACTACTTGGAATACGTTAAAAGAGAGAAACAAGGCCGTGTCAAAGCATTTTTCCTCAAATACTTAAATAGTTGGGTTGTTGGCATTTACTGC
CACAAGGTAAACTTCTTTCTTCTTTACAGCCACTAGGACATGATAGAGTGATTGCTCAATTATGTGAATATATCCAATGGCTGGGTTTAATTTGAGAATC
AAGACAGTTTGTTGGAATGTGACCACAATTATGGCCGGTCCTTTTGATGTGAATCAGGACTTGTACCAATGATGTTACTCCTGCAGGTAATCAGGTTATC
TGCTGCGACTCAAGAATACCCTAAATCTATAGTCTGCAATGTTCATGGCGTCAACCCTAAATTTCTCGAAATTGGGTTGAGAAAACTAGAACAGCAGAAG
CTCCAGGAGCAGCCCTTCACTAAAGGCGCATACTACATTGGTAAGATGGTCTGGAGCAAAGGGTACAAGGAGCTTCTTAAACTACTTGAGAAACACCAAA
AGGAACTTGCCGAGTTAGAGGTTGATTTATACGGTGATGGAGAGGACTCTGAAGAGATCAAAGAAGCAGCCCGAAAACTCGACTTGACGGTTAATGTTTA
CCCAGGACGTGATCACGCTGACTCGCTATTTCACAAGTAAGTCTCTAGTTCTTAACAGCCTCAAGATTGATTGATTTCCTTGCAGTCTATCGGATTCTAT
ACCTTAAACTTTTCCATCTTCTATTTTCAGCTATAAAGTGTTTCTCAACCCCAGCACGACAGACGTTGTGTGTACAACAACTGCAGAAGCCTTGGCGATG
GGAAAAATAGTAGTATGCGCGAATCACATATCGAACAAGTTCTTCAAACAGTTTCCCAACTGCAGAACCTATGACGATGGACAAGGTTTTGTAAGAGCCA
CGCTCAAGGCTCTTGGGGAACAACCATCGCAACTTACAGAGCAACAAAGGCATGAACTATCATGGGAAGCTGCTACACAACGGTTTATAAAAGTCTCTGA
TCTGAACCGGTTATCAAGAGCTGATTCGAACTTGTCAAAGAGAAGTGTGTTTGCGTCATCTTCGATTAGTGTGGGGAAAAACTTGGAGGATATGTCAGCG
TATATTCATTTCTTGGCGTCTGGATTTGAAGCTTCCAGAACAGCTTTTGGTGCTATACCTGGAAGCTTGCAGCCCGATGAAGAGTTATGTAGAGATCTTG
GTTTGTCTCTCAACACTCCTTCCCCAAATACTCGCAAGCAAGATTGACCTGTTTTTTAATTTATCTTTGTCTGCATATCATTGGGATATTTTTGTGTATA
AATCAATGTATACTATCTGAATCATTCTATAGCAGCTTTGGTGTAATATTGATGATGAAAGTTAGATTTTTCATCTTGTGGAACATGTATGATGACACGA
GTCTGAATTATAAAATTTAGTATATGATTCCATT
AT4G00550.1 Coding Sequence (CDS) 1419 bases
ATGACTAATCAGCAGGAGCAACACATTGCGATATTTACAACAGCTAGTATTCCATGGCTTACGGGAACTGCTGTTAATCCTCTCTTCCGTGCTGCCTACC
TTGCAAATGATGGGGAAAGACGGGTCACGTTGGTGATTCCATGGCTGACTTTGAAGCACCAAAAGCTTGTCTACCCAAATAGCATCACTTTTAGTTCCCC
GTCAGAGCAAGAAGCTTATGTCCGCCAGTGGCTTGAGGAGAGAGTCTCTTTTCGTTTAGCCTTTGAGATACGTTTCTATCCTGGAAAGTTTGCTATTGAC
AAAAGGAGTATTCTTCCTGTTGGGGATATATCTGATGCCATTCCTGATGAAGAGGCAGACATTGCTGTCCTCGAGGAGCCTGAGCATCTCACATGGTTTC
ATCATGGCCAAAAATGGAAAACTAAGTTCAACTACGTCATAGGAATCGTACACACTAACTACTTGGAATACGTTAAAAGAGAGAAACAAGGCCGTGTCAA
AGCATTTTTCCTCAAATACTTAAATAGTTGGGTTGTTGGCATTTACTGCCACAAGGTAATCAGGTTATCTGCTGCGACTCAAGAATACCCTAAATCTATA
GTCTGCAATGTTCATGGCGTCAACCCTAAATTTCTCGAAATTGGGTTGAGAAAACTAGAACAGCAGAAGCTCCAGGAGCAGCCCTTCACTAAAGGCGCAT
ACTACATTGGTAAGATGGTCTGGAGCAAAGGGTACAAGGAGCTTCTTAAACTACTTGAGAAACACCAAAAGGAACTTGCCGAGTTAGAGGTTGATTTATA
CGGTGATGGAGAGGACTCTGAAGAGATCAAAGAAGCAGCCCGAAAACTCGACTTGACGGTTAATGTTTACCCAGGACGTGATCACGCTGACTCGCTATTT
CACAACTATAAAGTGTTTCTCAACCCCAGCACGACAGACGTTGTGTGTACAACAACTGCAGAAGCCTTGGCGATGGGAAAAATAGTAGTATGCGCGAATC
ACATATCGAACAAGTTCTTCAAACAGTTTCCCAACTGCAGAACCTATGACGATGGACAAGGTTTTGTAAGAGCCACGCTCAAGGCTCTTGGGGAACAACC
ATCGCAACTTACAGAGCAACAAAGGCATGAACTATCATGGGAAGCTGCTACACAACGGTTTATAAAAGTCTCTGATCTGAACCGGTTATCAAGAGCTGAT
TCGAACTTGTCAAAGAGAAGTGTGTTTGCGTCATCTTCGATTAGTGTGGGGAAAAACTTGGAGGATATGTCAGCGTATATTCATTTCTTGGCGTCTGGAT
TTGAAGCTTCCAGAACAGCTTTTGGTGCTATACCTGGAAGCTTGCAGCCCGATGAAGAGTTATGTAGAGATCTTGGTTTGTCTCTCAACACTCCTTCCCC
AAATACTCGCAAGCAAGATTGA
AT4G00550.1 cDNA Sequence 1891 bases
GATTCTTCTTCGTTCTAGACTTGGCGGAAAAAGAATGTTGGAGATTGGAGGATCCTGCGAAGACCAACCAGTCTGTTAATTTTGTATAAACAATGAAACG
AAGAAGATCTTCCGAGAATATTCTCTCCTTCTCACGCATACCCTAGAATATTGTTTCGTCTCTCTTCCTTCTACGTTTGCTTATTTGCCCCAACTCGACG
CGAATCATCAGCTTTTATAAATTCTGTCAACTCAAAGATTGTTTCTGAATTGGAATCTTACAGAGGTTTAGCTTGAGATGATATGACTAATCAGCAGGAG
CAACACATTGCGATATTTACAACAGCTAGTATTCCATGGCTTACGGGAACTGCTGTTAATCCTCTCTTCCGTGCTGCCTACCTTGCAAATGATGGGGAAA
GACGGGTCACGTTGGTGATTCCATGGCTGACTTTGAAGCACCAAAAGCTTGTCTACCCAAATAGCATCACTTTTAGTTCCCCGTCAGAGCAAGAAGCTTA
TGTCCGCCAGTGGCTTGAGGAGAGAGTCTCTTTTCGTTTAGCCTTTGAGATACGTTTCTATCCTGGAAAGTTTGCTATTGACAAAAGGAGTATTCTTCCT
GTTGGGGATATATCTGATGCCATTCCTGATGAAGAGGCAGACATTGCTGTCCTCGAGGAGCCTGAGCATCTCACATGGTTTCATCATGGCCAAAAATGGA
AAACTAAGTTCAACTACGTCATAGGAATCGTACACACTAACTACTTGGAATACGTTAAAAGAGAGAAACAAGGCCGTGTCAAAGCATTTTTCCTCAAATA
CTTAAATAGTTGGGTTGTTGGCATTTACTGCCACAAGGTAATCAGGTTATCTGCTGCGACTCAAGAATACCCTAAATCTATAGTCTGCAATGTTCATGGC
GTCAACCCTAAATTTCTCGAAATTGGGTTGAGAAAACTAGAACAGCAGAAGCTCCAGGAGCAGCCCTTCACTAAAGGCGCATACTACATTGGTAAGATGG
TCTGGAGCAAAGGGTACAAGGAGCTTCTTAAACTACTTGAGAAACACCAAAAGGAACTTGCCGAGTTAGAGGTTGATTTATACGGTGATGGAGAGGACTC
TGAAGAGATCAAAGAAGCAGCCCGAAAACTCGACTTGACGGTTAATGTTTACCCAGGACGTGATCACGCTGACTCGCTATTTCACAACTATAAAGTGTTT
CTCAACCCCAGCACGACAGACGTTGTGTGTACAACAACTGCAGAAGCCTTGGCGATGGGAAAAATAGTAGTATGCGCGAATCACATATCGAACAAGTTCT
TCAAACAGTTTCCCAACTGCAGAACCTATGACGATGGACAAGGTTTTGTAAGAGCCACGCTCAAGGCTCTTGGGGAACAACCATCGCAACTTACAGAGCA
ACAAAGGCATGAACTATCATGGGAAGCTGCTACACAACGGTTTATAAAAGTCTCTGATCTGAACCGGTTATCAAGAGCTGATTCGAACTTGTCAAAGAGA
AGTGTGTTTGCGTCATCTTCGATTAGTGTGGGGAAAAACTTGGAGGATATGTCAGCGTATATTCATTTCTTGGCGTCTGGATTTGAAGCTTCCAGAACAG
CTTTTGGTGCTATACCTGGAAGCTTGCAGCCCGATGAAGAGTTATGTAGAGATCTTGGTTTGTCTCTCAACACTCCTTCCCCAAATACTCGCAAGCAAGA
TTGACCTGTTTTTTAATTTATCTTTGTCTGCATATCATTGGGATATTTTTGTGTATAAATCAATGTATACTATCTGAATCATTCTATAGCAGCTTTGGTG
TAATATTGATGATGAAAGTTAGATTTTTCATCTTGTGGAACATGTATGATGACACGAGTCTGAATTATAAAATTTAGTATATGATTCCATT