ATIDB : The Arabidopsis thaliana Integrated Database
Names and Synonyms
TOC75-III
AT3G46740
Gene Ontology Terms
GO:0010006 [AMIGO Graph]
Term : cellular_component, Toc complex
Definition : Protein translocon complex at the chloroplast outer membrane.
GO:0009658 [AMIGO Graph]
Term : biological_process, chloroplast organization and biogenesis
Definition : The assembly and arrangement of the chloroplast.
GO:0031359 [AMIGO Graph]
Term : cellular_component, integral to chloroplast outer membrane
Definition : Penetrating at least one phospholipid bilayer of the chloroplast outer membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer.
GO:0048598 [AMIGO Graph]
Term : biological_process, embryonic morphogenesis
Definition : The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific and may be somewhat arbitrary. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants.
GO:0045036 [AMIGO Graph]
Term : biological_process, protein targeting to chloroplast
Definition : The process of directing proteins towards the chloroplast using signals contained within the protein. Imported proteins are synthesized as cytosolic precursors containing N-terminal uptake-targeting sequences that direct each protein to its correct subcompartment and are subsequently cleaved.
MIPS Functional Catalogue Classifications
| [14] |
PROTEIN FATE (folding, modification, destination) |
| [14.04] |
protein targeting, sorting and translocation |
| [20] |
CELLULAR TRANSPORT, TRANSPORT FACILITATION AND TRANSPORT ROUTES |
| [20.09] |
transport routes |
| [20.09.02] |
chloroplast transport |
| [42] |
BIOGENESIS OF CELLULAR COMPONENTS |
| [42.26] |
plastid |
| [42.26.03] |
chloroplast |
Gene Predictions [*]
Gene Insertions
Flanking Sequence : T-DNA_LB.GK-221C08-014204 [Graphical View|Text]
Location : chromosome 3, base 17230263-17230264
Mapping Score 1
[see FAQ]
Flanking Sequence : T-DNA_LB.GK-668C11-024026 [Graphical View|Text]
Location : chromosome 3, base 17230143-17230144
Mapping Score 5
[see FAQ]
Flanking Sequence : T-DNA_LB.SALK_015928 [Graphical View|Text]
Location : chromosome 3, base 17229925-17229926
Mapping Score 5
[see FAQ]
Flanking Sequence : T-DNA_LB.WISC.WiscDsLox345-348C23 [Graphical View|Text]
Location : chromosome 3, base 17228666-17228667
Mapping Score 2
[see FAQ]
Flanking Sequence : T-DNA_LB.SALK_062094 [Graphical View|Text]
Location : chromosome 3, base 17228531-17228532
Mapping Score 1
[see FAQ]
Design Validation Primers
Automatically design primers for insert validation
InterProScan results
Sequences
AT3G46740.1 Sequences
AT3G46740.1, Protein sequence 818 amino acids
MAAFSVNGQLIPTATSSTASTSLSSRRKFLSPSSSRLPRISTQSPRVPSIKCSKSLPNRD
TETSSKDSLLKNLAKPLAVASVSSAASFFLFRISNLPSVLTGGGGGGDGNFGGFGGGGGG
GDGNDGGFWGKLFSPSPAVADEEQSPDWDSHGLPANIVVQLNKLSGFKKYKVSDIMFFDR
RRQTTIGTEDSFFEMVSIRPGGVYTKAQLQKELETLATCGMFEKVDLEGKTKPDGTLGVT
ISFAESTWQSADRFRCINVGLMVQSKPIEMDSDMTDKEKLEYYRSLEKDYKRRIDRARPC
LLPAPVYGEVMQMLRDQGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTKEVVCE
VVEGDITQLVIQFQDKLGNVVEGNTQVPVVRRELPKQLRQGYVFNIEAGKKALSNINSLG
LFSNIEVNPRPDEKNEGGIIVEIKLKELEQKSAEVSTEWSIVPGRGGAPTLASFQPGGSV
TFEHRNLQGLNRSLMGSVTTSNFLNPQDDLSFKLEYVHPYLDGVYNPRNRTFKTSCFNSR
KLSPVFTGGPGVEEVPPIWVDRAGVKANITENFTRQSKFTYGLVMEEITTRDESSHIAAN
GQRLLPSGGISADGPPTTLSGTGVDRMAFLQANITRDNTKFVNGAVVGQRTVFQVDQGLG
IGSKFPFFNRHQLTMTKFIQLREVEQGAGKSPPPVLVLHGHYGGCVGDLPSYDAFVLGGP
YSVRGYNMGELGAARNIAEVGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTAVYRRT
GQGSSYGAGVKLGLVRAEYAVDHNNGTGALFFRFGERY*
AT3G46740.1 Sequence 3531 bases
ATCTTCACTTGCTTCTTCTTCTCTCTGAAACCTTATCTTCTCCGCCCATGGCCGCCTTCTCCGTCAACGGGCAGCTTATCCCGACGGCAACAAGCTCCAC
TGCTTCCACCTCTCTCTCTTCCCGTCGGAAATTTCTCTCTCCTTCCTCGTCTCGTCTCCCTCGCATCTCCACTCAATCTCCTCGTGTCCCATCGATAAAA
TGCAGCAAAAGCTTACCTAACCGAGATACAGAGACTTCCTCAAAGGATTCTCTCCTTAAAAACCTAGCTAAACCTCTAGCCGTAGCCTCAGTCTCCTCCG
CTGCTTCATTCTTTCTGTTCCGAATCTCGAATCTTCCGTCGGTTCTGACCGGTGGTGGAGGAGGAGGAGATGGGAATTTCGGTGGATTTGGTGGTGGAGG
TGGTGGTGGAGATGGAAATGATGGTGGATTTTGGGGGAAATTGTTTTCTCCTTCACCAGCGGTTGCTGATGAAGAACAATCACCGGATTGGGATTCTCAT
GGTTTACCGGCGAATATCGTTGTGCAATTGAACAAGCTTAGTGGTTTCAAGAAGTATAAGGTATCTGATATTATGTTCTTTGATCGACGGAGACAAACCA
CTATTGGTACTGAAGATTCCTTCTTCGAGATGGTCTCGATTCGTCCTGGTGGAGTTTACACTAAAGCTCAATTGCAGAAGGAGCTTGAAACCCTAGCTAC
TTGTGGAATGTTTGAGAAAGTTGATTTGGAAGGGAAAACGAAACCTGATGGAACCCTAGGTGTTACAATCTCGTTTGCTGAGAGTACATGGCAATCTGCT
GATAGGTTTAGATGTATTAACGTTGGGTTAATGGTACAGTCGAAACCTATTGAGATGGATTCAGATATGACTGATAAAGAGAAGCTTGAGTATTACAGGA
GTTTGGAGAAGGATTACAAGAGGAGAATTGATAGGGCACGGCCTTGTTTGTTGCCTGCACCTGTGTATGGTGAGGTTATGCAGATGTTGAGGGATCAAGG
GAAAGTGAGTGCTAGGCTGTTGCAGAGGATTAGGGACCGTGTTCAGAAATGGTATCATGATGAAGGGTATGCTTGTGCTCAAGTTGTGAATTTTGGGAAT
TTGAATACTAAGGAGGTTGTTTGTGAAGTTGTGGAAGGTGATATAACTCAGCTAGTTATTCAGTTTCAAGATAAGCTTGGTAATGTGGTTGAAGGAAATA
CTCAAGTTCCTGTGGTGCGCAGGGAATTGCCTAAGCAGGTATGTTTCTCAAGTTCTGCTATGTCAGATATGTCATTGTTGATGTGATCATGATTTAGTAT
AGGATGATGACGAAAGTGTAGTTATGTTATAGATTGATATGTCAGGAAAAAATTGACAGACTTTTAACTTGAACTTGCTATTTAAGTCTGATGGATGTAA
GAGGTTTAATTGCTTCAATGAACTCATTGTACAAATGTTTTATATTCCAGACATGTAATGATATATCTCATTTGTTATGTTAGTTTTAGTGATAGTTTCG
ATGTTTCGTTGAACAGCTTCGCCAAGGCTATGTTTTCAACATTGAAGCTGGGAAAAAAGCTCTCAGTAACATCAATTCATTGGGGCTGTTCTCTAACATT
GAAGTCAATCCACGCCCAGATGAGAAAAATGAAGGGGGCATTATTGTTGAGATCAAGCTTAAGGAGCTAGAACAGAAGTCAGCTGAAGTCAGTACAGAAT
GGAGTATTGTTCCTGGGCGTGGAGGAGCTCCCACATTGGTATGAATCCTTCCTTACTGAAATAAGTACAGATTGTAAAATTTGAGAAGTTCCATTGAGTT
TGATTGTTATTGTTTATATGCATCAGGCTTCATTCCAGCCAGGTGGTTCTGTTACTTTCGAGCATCGAAACCTCCAGGGTCTTAATAGGTCTCTCATGGG
TTCAGTGACCACTAGCAACTTCTTGAATCCTCAGGTACATTCGATAAGCTTACATGATTGATACATCTCTGGTTCAACTTTTCGGTTGATAACATCCATC
TATTTCTGTTTCTATGTGCTAAGCACAAACCTTATGTTACATTTTTTCCTCAGGATGATCTTTCGTTTAAGCTTGAGTATGTGCACCCGTATCTGGATGG
TGTTTACAATCCTCGGAACCGAACATTCAAAACAAGCTGCTTCAACAGCCGCAAACTTAGCCCAGTATTCACTGGAGGACCTGGTGTTGAGGAAGTGCCA
CCAATTTGGGTTGACCGAGCTGGTGTGAAAGCTAATATAACTGAGGTAAGCTTGCCAATCCTCAGTGCCATAATCGACTTATTTTGTCCTACAAACACTT
AACTGAAACATATTTTCATGCAGAACTTCACCCGTCAGAGTAAGTTTACATATGGACTTGTGATGGAGGAGATAACAACCCGAGATGAAAGCAGTCACAT
TGCTGCAAATGGTCAGAGACTACTACCTAGCGGTGGAATCAGTGCTGATGGACCTCCAACAACTCTCAGTGGTACCGGTGTCGATCGAATGGCTTTTCTA
CAAGCCAACATCACCCGTGACAATACCAAATTTGTTAATGGGGCAGTTGTTGGACAGAGGACTGTCTTTCAGGTTTGCTTTCCCAATGATCAAATGAGAT
TATAAGGATGAGTCATCTGTATATTGTAAGCTTTACACAATGTATTTGCAAATCACAGGTTGATCAGGGATTGGGTATTGGGAGCAAATTCCCGTTCTTC
AACCGCCACCAGTTAACCATGACAAAATTCATTCAGTTGCGGGAAGTAGAACAAGGGGCTGGTAAGTCACCACCACCAGTTCTAGTCCTCCATGGGCATT
ACGGAGGCTGCGTTGGCGACCTTCCAAGCTACGATGCTTTTGTCCTCGGTGGTCCGTACTCTGTCCGTGGCTACAACATGGGAGAGCTCGGTGCTGCTAG
AAACATTGCCGAGGTAATACAGCAAACACTCAAAACAAAAACAGTCTTTTCTCCTAAACCCGAAAAATATGTGTGTCTAATTTGGTTTCATGGATTACAG
GTCGGTGCTGAGATCAGAATACCCGTGAAGAACACACATGTCTACGCTTTTGTTGAGCATGGAAATGATTTAGGAAGCTCAAAGGATGTGAAGGGAAACC
CTACAGCAGTGTACAGGAGAACGGGTCAGGGTTCATCCTATGGTGCAGGTGTGAAACTCGGTTTGGTCCGAGCTGAGTATGCTGTAGATCACAACAATGG
AACCGGTGCTCTGTTCTTCCGATTTGGAGAGAGGTATTAAGGTAATGTGAGAAGCAGGCTCATGTTATCCACCTTAGTCTTTTCATTTTCTCTGTTGAGG
ATCTGCTATTTTTCTCTTTTTTCCTTTTCTTTTGTGTTTTCTTTTTTTTTTTCTACTTCTTTTTCAATAATTGTTTAATGTTAGTGTTTGATGACGTTGC
TGAGTTGTGCTGAGAATCGGGAAAGAGTTTGTTCTTCGTAATATGTCTAGACTTTTGTAGGAAAATTTTGAAACTTTCAAGTTTCAAAAAATCGTATGAA
TAGTTGACAAATGAAAATTTATATTGGTAAC
AT3G46740.1 Coding Sequence (CDS) 2454 bases
ATGGCCGCCTTCTCCGTCAACGGGCAGCTTATCCCGACGGCAACAAGCTCCACTGCTTCCACCTCTCTCTCTTCCCGTCGGAAATTTCTCTCTCCTTCCT
CGTCTCGTCTCCCTCGCATCTCCACTCAATCTCCTCGTGTCCCATCGATAAAATGCAGCAAAAGCTTACCTAACCGAGATACAGAGACTTCCTCAAAGGA
TTCTCTCCTTAAAAACCTAGCTAAACCTCTAGCCGTAGCCTCAGTCTCCTCCGCTGCTTCATTCTTTCTGTTCCGAATCTCGAATCTTCCGTCGGTTCTG
ACCGGTGGTGGAGGAGGAGGAGATGGGAATTTCGGTGGATTTGGTGGTGGAGGTGGTGGTGGAGATGGAAATGATGGTGGATTTTGGGGGAAATTGTTTT
CTCCTTCACCAGCGGTTGCTGATGAAGAACAATCACCGGATTGGGATTCTCATGGTTTACCGGCGAATATCGTTGTGCAATTGAACAAGCTTAGTGGTTT
CAAGAAGTATAAGGTATCTGATATTATGTTCTTTGATCGACGGAGACAAACCACTATTGGTACTGAAGATTCCTTCTTCGAGATGGTCTCGATTCGTCCT
GGTGGAGTTTACACTAAAGCTCAATTGCAGAAGGAGCTTGAAACCCTAGCTACTTGTGGAATGTTTGAGAAAGTTGATTTGGAAGGGAAAACGAAACCTG
ATGGAACCCTAGGTGTTACAATCTCGTTTGCTGAGAGTACATGGCAATCTGCTGATAGGTTTAGATGTATTAACGTTGGGTTAATGGTACAGTCGAAACC
TATTGAGATGGATTCAGATATGACTGATAAAGAGAAGCTTGAGTATTACAGGAGTTTGGAGAAGGATTACAAGAGGAGAATTGATAGGGCACGGCCTTGT
TTGTTGCCTGCACCTGTGTATGGTGAGGTTATGCAGATGTTGAGGGATCAAGGGAAAGTGAGTGCTAGGCTGTTGCAGAGGATTAGGGACCGTGTTCAGA
AATGGTATCATGATGAAGGGTATGCTTGTGCTCAAGTTGTGAATTTTGGGAATTTGAATACTAAGGAGGTTGTTTGTGAAGTTGTGGAAGGTGATATAAC
TCAGCTAGTTATTCAGTTTCAAGATAAGCTTGGTAATGTGGTTGAAGGAAATACTCAAGTTCCTGTGGTGCGCAGGGAATTGCCTAAGCAGCTTCGCCAA
GGCTATGTTTTCAACATTGAAGCTGGGAAAAAAGCTCTCAGTAACATCAATTCATTGGGGCTGTTCTCTAACATTGAAGTCAATCCACGCCCAGATGAGA
AAAATGAAGGGGGCATTATTGTTGAGATCAAGCTTAAGGAGCTAGAACAGAAGTCAGCTGAAGTCAGTACAGAATGGAGTATTGTTCCTGGGCGTGGAGG
AGCTCCCACATTGGCTTCATTCCAGCCAGGTGGTTCTGTTACTTTCGAGCATCGAAACCTCCAGGGTCTTAATAGGTCTCTCATGGGTTCAGTGACCACT
AGCAACTTCTTGAATCCTCAGGATGATCTTTCGTTTAAGCTTGAGTATGTGCACCCGTATCTGGATGGTGTTTACAATCCTCGGAACCGAACATTCAAAA
CAAGCTGCTTCAACAGCCGCAAACTTAGCCCAGTATTCACTGGAGGACCTGGTGTTGAGGAAGTGCCACCAATTTGGGTTGACCGAGCTGGTGTGAAAGC
TAATATAACTGAGAACTTCACCCGTCAGAGTAAGTTTACATATGGACTTGTGATGGAGGAGATAACAACCCGAGATGAAAGCAGTCACATTGCTGCAAAT
GGTCAGAGACTACTACCTAGCGGTGGAATCAGTGCTGATGGACCTCCAACAACTCTCAGTGGTACCGGTGTCGATCGAATGGCTTTTCTACAAGCCAACA
TCACCCGTGACAATACCAAATTTGTTAATGGGGCAGTTGTTGGACAGAGGACTGTCTTTCAGGTTGATCAGGGATTGGGTATTGGGAGCAAATTCCCGTT
CTTCAACCGCCACCAGTTAACCATGACAAAATTCATTCAGTTGCGGGAAGTAGAACAAGGGGCTGGTAAGTCACCACCACCAGTTCTAGTCCTCCATGGG
CATTACGGAGGCTGCGTTGGCGACCTTCCAAGCTACGATGCTTTTGTCCTCGGTGGTCCGTACTCTGTCCGTGGCTACAACATGGGAGAGCTCGGTGCTG
CTAGAAACATTGCCGAGGTCGGTGCTGAGATCAGAATACCCGTGAAGAACACACATGTCTACGCTTTTGTTGAGCATGGAAATGATTTAGGAAGCTCAAA
GGATGTGAAGGGAAACCCTACAGCAGTGTACAGGAGAACGGGTCAGGGTTCATCCTATGGTGCAGGTGTGAAACTCGGTTTGGTCCGAGCTGAGTATGCT
GTAGATCACAACAATGGAACCGGTGCTCTGTTCTTCCGATTTGGAGAGAGGTATTAA
AT3G46740.1 cDNA Sequence 2795 bases
ATCTTCACTTGCTTCTTCTTCTCTCTGAAACCTTATCTTCTCCGCCCATGGCCGCCTTCTCCGTCAACGGGCAGCTTATCCCGACGGCAACAAGCTCCAC
TGCTTCCACCTCTCTCTCTTCCCGTCGGAAATTTCTCTCTCCTTCCTCGTCTCGTCTCCCTCGCATCTCCACTCAATCTCCTCGTGTCCCATCGATAAAA
TGCAGCAAAAGCTTACCTAACCGAGATACAGAGACTTCCTCAAAGGATTCTCTCCTTAAAAACCTAGCTAAACCTCTAGCCGTAGCCTCAGTCTCCTCCG
CTGCTTCATTCTTTCTGTTCCGAATCTCGAATCTTCCGTCGGTTCTGACCGGTGGTGGAGGAGGAGGAGATGGGAATTTCGGTGGATTTGGTGGTGGAGG
TGGTGGTGGAGATGGAAATGATGGTGGATTTTGGGGGAAATTGTTTTCTCCTTCACCAGCGGTTGCTGATGAAGAACAATCACCGGATTGGGATTCTCAT
GGTTTACCGGCGAATATCGTTGTGCAATTGAACAAGCTTAGTGGTTTCAAGAAGTATAAGGTATCTGATATTATGTTCTTTGATCGACGGAGACAAACCA
CTATTGGTACTGAAGATTCCTTCTTCGAGATGGTCTCGATTCGTCCTGGTGGAGTTTACACTAAAGCTCAATTGCAGAAGGAGCTTGAAACCCTAGCTAC
TTGTGGAATGTTTGAGAAAGTTGATTTGGAAGGGAAAACGAAACCTGATGGAACCCTAGGTGTTACAATCTCGTTTGCTGAGAGTACATGGCAATCTGCT
GATAGGTTTAGATGTATTAACGTTGGGTTAATGGTACAGTCGAAACCTATTGAGATGGATTCAGATATGACTGATAAAGAGAAGCTTGAGTATTACAGGA
GTTTGGAGAAGGATTACAAGAGGAGAATTGATAGGGCACGGCCTTGTTTGTTGCCTGCACCTGTGTATGGTGAGGTTATGCAGATGTTGAGGGATCAAGG
GAAAGTGAGTGCTAGGCTGTTGCAGAGGATTAGGGACCGTGTTCAGAAATGGTATCATGATGAAGGGTATGCTTGTGCTCAAGTTGTGAATTTTGGGAAT
TTGAATACTAAGGAGGTTGTTTGTGAAGTTGTGGAAGGTGATATAACTCAGCTAGTTATTCAGTTTCAAGATAAGCTTGGTAATGTGGTTGAAGGAAATA
CTCAAGTTCCTGTGGTGCGCAGGGAATTGCCTAAGCAGCTTCGCCAAGGCTATGTTTTCAACATTGAAGCTGGGAAAAAAGCTCTCAGTAACATCAATTC
ATTGGGGCTGTTCTCTAACATTGAAGTCAATCCACGCCCAGATGAGAAAAATGAAGGGGGCATTATTGTTGAGATCAAGCTTAAGGAGCTAGAACAGAAG
TCAGCTGAAGTCAGTACAGAATGGAGTATTGTTCCTGGGCGTGGAGGAGCTCCCACATTGGCTTCATTCCAGCCAGGTGGTTCTGTTACTTTCGAGCATC
GAAACCTCCAGGGTCTTAATAGGTCTCTCATGGGTTCAGTGACCACTAGCAACTTCTTGAATCCTCAGGATGATCTTTCGTTTAAGCTTGAGTATGTGCA
CCCGTATCTGGATGGTGTTTACAATCCTCGGAACCGAACATTCAAAACAAGCTGCTTCAACAGCCGCAAACTTAGCCCAGTATTCACTGGAGGACCTGGT
GTTGAGGAAGTGCCACCAATTTGGGTTGACCGAGCTGGTGTGAAAGCTAATATAACTGAGAACTTCACCCGTCAGAGTAAGTTTACATATGGACTTGTGA
TGGAGGAGATAACAACCCGAGATGAAAGCAGTCACATTGCTGCAAATGGTCAGAGACTACTACCTAGCGGTGGAATCAGTGCTGATGGACCTCCAACAAC
TCTCAGTGGTACCGGTGTCGATCGAATGGCTTTTCTACAAGCCAACATCACCCGTGACAATACCAAATTTGTTAATGGGGCAGTTGTTGGACAGAGGACT
GTCTTTCAGGTTGATCAGGGATTGGGTATTGGGAGCAAATTCCCGTTCTTCAACCGCCACCAGTTAACCATGACAAAATTCATTCAGTTGCGGGAAGTAG
AACAAGGGGCTGGTAAGTCACCACCACCAGTTCTAGTCCTCCATGGGCATTACGGAGGCTGCGTTGGCGACCTTCCAAGCTACGATGCTTTTGTCCTCGG
TGGTCCGTACTCTGTCCGTGGCTACAACATGGGAGAGCTCGGTGCTGCTAGAAACATTGCCGAGGTCGGTGCTGAGATCAGAATACCCGTGAAGAACACA
CATGTCTACGCTTTTGTTGAGCATGGAAATGATTTAGGAAGCTCAAAGGATGTGAAGGGAAACCCTACAGCAGTGTACAGGAGAACGGGTCAGGGTTCAT
CCTATGGTGCAGGTGTGAAACTCGGTTTGGTCCGAGCTGAGTATGCTGTAGATCACAACAATGGAACCGGTGCTCTGTTCTTCCGATTTGGAGAGAGGTA
TTAAGGTAATGTGAGAAGCAGGCTCATGTTATCCACCTTAGTCTTTTCATTTTCTCTGTTGAGGATCTGCTATTTTTCTCTTTTTTCCTTTTCTTTTGTG
TTTTCTTTTTTTTTTTCTACTTCTTTTTCAATAATTGTTTAATGTTAGTGTTTGATGACGTTGCTGAGTTGTGCTGAGAATCGGGAAAGAGTTTGTTCTT
CGTAATATGTCTAGACTTTTGTAGGAAAATTTTGAAACTTTCAAGTTTCAAAAAATCGTATGAATAGTTGACAAATGAAAATTTATATTGGTAAC