ATIDB : The Arabidopsis thaliana Integrated Database
Names and Synonyms
LACS9
AT1G77590.1
AT1G77590
LONG CHAIN ACYL-COA SYNTHETASE 9
AT1G77590
T5M16.18
T5M16_18
Gene Ontology Terms
GO:0004467 [AMIGO Graph]
Term : molecular_function, long-chain-fatty-acid-CoA ligase activity
Definition : Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18.
GO:0006631 [AMIGO Graph]
Term : biological_process, fatty acid metabolism
Definition : The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.
GO:0009507 [AMIGO Graph]
Term : cellular_component, chloroplast
Definition : A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
GO:0004467 [AMIGO Graph]
Term : molecular_function, long-chain-fatty-acid-CoA ligase activity
Definition : Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18.
GO:0006633 [AMIGO Graph]
Term : biological_process, fatty acid biosynthesis
Definition : The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
MIPS Functional Catalogue Classifications
| [99] |
UNCLASSIFIED PROTEINS |
Gene Predictions [*]
Gene Insertions
Flanking Sequence : T-DNA_LB.SALK_111835.38.00.x [Graphical View|Text]
Location : chromosome 1, base 29156553-29156554
Mapping Score 1
[see FAQ]
Flanking Sequence : T-DNA_LB.SALK_111833.20.20.x [Graphical View|Text]
Location : chromosome 1, base 29156354-29156355
Mapping Score 1
[see FAQ]
Flanking Sequence : T-DNA_LB.SALK_040810 [Graphical View|Text]
Location : chromosome 1, base 29155163-29155164
Mapping Score 5
[see FAQ]
Flanking Sequence : T-DNA_LB.SALK_041002 [Graphical View|Text]
Location : chromosome 1, base 29155162-29155163
Mapping Score 5
[see FAQ]
Flanking Sequence : T-DNA_LB.SALK_124615.45.95.x [Graphical View|Text]
Location : chromosome 1, base 29154219-29154220
Mapping Score 1
[see FAQ]
Flanking Sequence : T-DNA_LB.FLAG.322A02 [Graphical View|Text]
Location : chromosome 1, base 29154159-29154160
Mapping Score 5
[see FAQ]
Flanking Sequence : T-DNA_LB.FLAG.322F01 [Graphical View|Text]
Location : chromosome 1, base 29154146-29154147
Mapping Score 1
[see FAQ]
Flanking Sequence : T-DNA_LB.SALK_095484.21.25.x [Graphical View|Text]
Location : chromosome 1, base 29154021-29154022
Mapping Score 1
[see FAQ]
Flanking Sequence : T-DNA_LB.SALK_113248.50.60.x [Graphical View|Text]
Location : chromosome 1, base 29153665-29153666
Mapping Score 1
[see FAQ]
Flanking Sequence : T-DNA_LB.SALK_053069.48.85.x [Graphical View|Text]
Location : chromosome 1, base 29153603-29153604
Mapping Score 2
[see FAQ]
Flanking Sequence : T-DNA_LB.SALK_030108.56.00.x [Graphical View|Text]
Location : chromosome 1, base 29153471-29153472
Mapping Score 5
[see FAQ]
Flanking Sequence : T-DNA_LB.GK-532G05-020365 [Graphical View|Text]
Location : chromosome 1, base 29153468-29153469
Mapping Score 2
[see FAQ]
Flanking Sequence : T-DNA_LB.SALK_102518.56.00.x [Graphical View|Text]
Location : chromosome 1, base 29153218-29153219
Mapping Score 1
[see FAQ]
Design Validation Primers
Automatically design primers for insert validation
InterProScan results
Sequences
AT1G77590.1 Sequences
AT1G77590.1, Protein sequence 691 amino acids
MIPYAAGVIVPLALTFLVQKSKKEKKRGVVVDVGGEPGYAIRNHRFTEPVSSHWEHISTL
PELFEISCNAHSDRVFLGTRKLISREIETSEDGKTFEKLHLGDYEWLTFGKTLEAVCDFA
SGLVQIGHKTEERVAIFADTREEWFISLQGCFRRNVTVVTIYSSLGEEALCHSLNETEVT
TVICGSKELKKLMDISQQLETVKRVICMDDEFPSDVNSNWMATSFTDVQKLGRENPVDPN
FPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATVSAVMTIVPDLGKRDIYMAYLPLAHIL
ELAAESVMATIGSAIGYGSPLTLTDTSNKIKKGTKGDVTALKPTIMTAVPAILDRVRDGV
RKKVDAKGGLSKKLFDFAYARRLSAINGSWFGAWGLEKLLWDVLVFRKIRAVLGGQIRYL
LSGGAPLSGDTQRFINICVGAPIGQGYGLTETCAGGTFSEFEDTSVGRVGAPLPCSFVKL
VDWAEGGYLTSDKPMPRGEIVIGGSNITLGYFKNEEKTKEVYKVDEKGMRWFYTGDIGRF
HPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSISPYVENIMVHADSFYSYCVALVVAS
QHTVEGWASKQGIDFANFEELCTKEQAVKEVYASLVKAAKQSRLEKFEIPAKIKLLASPW
TPESGLVTAALKLKRDVIRREFSEDLTKLYA*
AT1G77590.1 Sequence 3521 bases
ATGATTCCTTATGCTGCTGGTGTTATTGTGCCATTGGCTTTGACGTTTCTGGTTCAGAAATCTAAGAAAGAAAAGAAAAGAGGTGTTGTTGTTGATGTTG
GTGGTGAACCAGGTTATGCTATTAGGAATCACAGGTTTACTGAGCCTGTTAGTTCCCATTGGGAACATATCTCAACGCTTCCAGAGCTCTTTGAGATATC
GTGTAATGCTCACAGTGATAGGGTTTTCCTTGGCACCCGAAAGCTGATCTCTAGAGAGATTGAGACTAGTGAGGATGGAAAAACGTTCGAGAAACTGCAT
TTAGGTGACTACGAGTGGCTCACTTTTGGGAAGACTCTCGAAGCAGTGTGTGATTTTGCCTCTGGGTTAGTTCAGATTGGGCACAAGACGGAAGAGCGTG
TCGCCATTTTTGCAGATACTAGAGAAGAATGGTTCATCTCCCTACAGGTGATTTCCATCTTTTCTTATACCTTTTCCTGTTTTCTCTGATTTATAATCCG
GATGGACTGTTGGTACGGTTATGAAATATTCTGTGTGATTCAATGTTTCAGGGTTGCTTCAGGCGCAACGTCACTGTGGTAACTATCTATTCATCTTTGG
GAGAGGAAGCTCTTTGTCACTCGCTGAATGAGGTAGCCCTTGCTCCTCTTTTCTGCTTTCTCTTTATTATGGCGACCTAAATCCATGTCATATATGCTCT
GCGGTTGTTTATGTCCTGATTGTTTCTGGTATAAGAGTCACATAGGTTGGAATGAGCTCTATGTTATCATGTGGATTAGTATTTTTCATATTTGTGTATG
CTTACCTTTCATATGTTCATGATTCCCTTTCTTTCACTTTCCAGACAGAGGTCACAACCGTAATATGTGGTAGCAAAGAACTCAAAAAGCTCATGGACAT
AAGCCAACAGCTTGAAACTGTGAAACGTGTGATATGCATGGATGATGAATTCCCATCTGATGTGAACAGTAATTGGATGGCGACTTCATTTACTGATGTT
CAGAAACTTGGCCGCGAAAATCCTGTGGATCCTAATTTCCCTCTCTCAGCAGATGTTGCTGTTATAATGTACACCAGTGGAAGCACTGGACTTCCCAAGG
TTAGAAAGTTTTCGAAACCAGTTGACGTGTACAACTGTTGTCTCAGAATAAAAATCTTGTCTATGGTTATCAAAATTGTTCTATCAGCTATTTGTTATTG
GTCCTGCAAAATTTACTTAATCTGACTTTCCCACTTCCCAAATAATGTAGGGTGTTATGATGACGCATGGTAATGTCCTAGCTACAGTTTCGGCAGTGAT
GACAATTGTTCCTGACCTTGGAAAGAGGGATATATACATGGCATATTTACCTTTGGCTCACATCCTTGAGTTAGCAGCTGAGGTATCTTAAAAGTTCATT
ACTCAATGCGTTTATATAGCAGTTCCACACTTCAGAGTATTTGAATGCGGCCTAATTCCATTGTTGTAGAGCGTAATGGCTACTATTGGGAGTGCTATTG
GATATGGGTCTCCCTTGACGCTAACGGATACTTCAAACAAGATAAAAAAGGGTACAAAAGGAGATGTCACAGCACTAAAGCCCACTATAATGACAGCTGT
TCCAGCCATTCTTGATCGTGTCAGGGATGGTGTCCGCAAAAAGGTTTGTGCATGTTAGATACACATCGAAATTCTTTGGTTGGCTATCCTCTGTTAAAGC
AGTTGAGCTCGTGCTCTCCTAGCTGTTTAAATAATTCCGGCTATCTCCCAGCAACCAAGATGTGCTAAATTGTCTTCATTCTCTTGTGAGTAAAACATTA
TAATTGCATAAGCACTGACAATTTATGACCATCAGGTTGATGCAAAGGGCGGATTGTCAAAGAAATTGTTTGACTTTGCATATGCTCGGCGATTATCTGC
AATCAATGGAAGTTGGTTTGGAGCCTGGGGATTGGAAAAGCTTTTGTGGGATGTGCTTGTGTTCAGGAAAATCCGTGCAGTTTTGGGAGGTCAAATCCGC
TATTTGCTCTCTGGTGGTGCCCCTCTTTCTGGTGACACTCAGAGATTCATTAACATCTGCGTTGGGTAAACGAATCCCTGAATATCTCCTTGAGGCTTGC
TACTCTCCAATATATCTTTTCGTCCCTTTCCATTTCTATGATCTAACACTGATATTCCTCAGGGCTCCAATCGGTCAGGGATATGGGCTCACAGAGACTT
GTGCTGGTGGAACCTTCTCGGAGTTTGAGGACACATCCGTTGGCCGTGTTGGTGCTCCACTTCCTTGCTCCTTTGTAAAGGTAACCTCTTTACCTGATTT
GTCCACTTTTAATACTTTGTTAGCTATTTATTAGTTTGTATGTCGTAGTCTCTTGTGATCATATGCTTATATCTTGTTTCAGCTAGTAGACTGGGCGGAA
GGTGGGTATCTAACTAGTGATAAGCCGATGCCCCGTGGTGAAATTGTAATTGGTGGCTCAAATATCACGCTTGGGTATTTCAAAAATGAGGAGAAAACTA
AAGAAGTGTACAAGGTGGCAAATCAACATTATTGGTTTCGGCAATGTTAAAAGAATTGGTTGGTTTGGTTCTTCCTCTAACCGTTTTATACACTTGAATG
TTCAAAGGTTGATGAAAAGGGAATGAGGTGGTTCTACACAGGAGACATAGGACGATTTCACCCTGATGGCTGCCTCGAGATAATAGACCGAAAAAAGGAT
ATCGTTAAACTTCAGCATGGAGAATATGTCTCCTTGGGCAAAGTATAGTTTTCTCAATCCGAATACCCTTTTTTGTCTTCATCACTCAATTCTCCGGAGA
AGCTTCTTAAAACATTCTTTTTTTTCGCAGGTTGAAGCTGCTCTAAGTATAAGTCCCTATGTTGAAAACATAATGGTTCATGCTGATTCGTTCTACAGTT
ACTGTGTGGCTCTTGTGGTCGCGTCCCAACATACAGTTGAAGGTTGGGCTTCAAAGCAAGGAATAGACTTTGCCAACTTCGAAGAACTGTGCACGAAAGA
GCAAGCCGTGAAAGAAGTGTATGCGTCCCTTGTGAAGGTATGTTCATTGCTACTCATTACCAAGCTATTTGAGTCCCCCAGTCATTTCCTTATAACATCT
GTGTTATGCAGGCGGCTAAACAATCACGATTGGAGAAGTTTGAGATACCAGCAAAGATCAAATTATTGGCATCTCCATGGACGCCAGAGTCAGGATTAGT
CACAGCAGCTCTAAAGCTGAAAAGAGATGTAATTAGGAGGGAATTCTCTGAAGATCTCACCAAGTTATATGCCTAAATTTTTCTTCTTCCTTTACTTTTT
TTTTTTTTACGTCTCGATGCATTCGAAAGACTTAACAGATGCACAAAAACTTAATTCTAAGAATAGTTATCTCTTTTCTCATTGATGTTTCTGTCTTTTC
GTGTAATTTGTGTGGGAACTAGGACGAGACAGAAAAAACAGAGTAATGGGTCTCTTACTCTCAACAATCTTTTTAGGCTTTGAGACCATGTCTATACAAC
TTAATGGGCCTTTATCAAACC
AT1G77590.1 Coding Sequence (CDS) 2073 bases
ATGATTCCTTATGCTGCTGGTGTTATTGTGCCATTGGCTTTGACGTTTCTGGTTCAGAAATCTAAGAAAGAAAAGAAAAGAGGTGTTGTTGTTGATGTTG
GTGGTGAACCAGGTTATGCTATTAGGAATCACAGGTTTACTGAGCCTGTTAGTTCCCATTGGGAACATATCTCAACGCTTCCAGAGCTCTTTGAGATATC
GTGTAATGCTCACAGTGATAGGGTTTTCCTTGGCACCCGAAAGCTGATCTCTAGAGAGATTGAGACTAGTGAGGATGGAAAAACGTTCGAGAAACTGCAT
TTAGGTGACTACGAGTGGCTCACTTTTGGGAAGACTCTCGAAGCAGTGTGTGATTTTGCCTCTGGGTTAGTTCAGATTGGGCACAAGACGGAAGAGCGTG
TCGCCATTTTTGCAGATACTAGAGAAGAATGGTTCATCTCCCTACAGGGTTGCTTCAGGCGCAACGTCACTGTGGTAACTATCTATTCATCTTTGGGAGA
GGAAGCTCTTTGTCACTCGCTGAATGAGACAGAGGTCACAACCGTAATATGTGGTAGCAAAGAACTCAAAAAGCTCATGGACATAAGCCAACAGCTTGAA
ACTGTGAAACGTGTGATATGCATGGATGATGAATTCCCATCTGATGTGAACAGTAATTGGATGGCGACTTCATTTACTGATGTTCAGAAACTTGGCCGCG
AAAATCCTGTGGATCCTAATTTCCCTCTCTCAGCAGATGTTGCTGTTATAATGTACACCAGTGGAAGCACTGGACTTCCCAAGGGTGTTATGATGACGCA
TGGTAATGTCCTAGCTACAGTTTCGGCAGTGATGACAATTGTTCCTGACCTTGGAAAGAGGGATATATACATGGCATATTTACCTTTGGCTCACATCCTT
GAGTTAGCAGCTGAGAGCGTAATGGCTACTATTGGGAGTGCTATTGGATATGGGTCTCCCTTGACGCTAACGGATACTTCAAACAAGATAAAAAAGGGTA
CAAAAGGAGATGTCACAGCACTAAAGCCCACTATAATGACAGCTGTTCCAGCCATTCTTGATCGTGTCAGGGATGGTGTCCGCAAAAAGGTTGATGCAAA
GGGCGGATTGTCAAAGAAATTGTTTGACTTTGCATATGCTCGGCGATTATCTGCAATCAATGGAAGTTGGTTTGGAGCCTGGGGATTGGAAAAGCTTTTG
TGGGATGTGCTTGTGTTCAGGAAAATCCGTGCAGTTTTGGGAGGTCAAATCCGCTATTTGCTCTCTGGTGGTGCCCCTCTTTCTGGTGACACTCAGAGAT
TCATTAACATCTGCGTTGGGGCTCCAATCGGTCAGGGATATGGGCTCACAGAGACTTGTGCTGGTGGAACCTTCTCGGAGTTTGAGGACACATCCGTTGG
CCGTGTTGGTGCTCCACTTCCTTGCTCCTTTGTAAAGCTAGTAGACTGGGCGGAAGGTGGGTATCTAACTAGTGATAAGCCGATGCCCCGTGGTGAAATT
GTAATTGGTGGCTCAAATATCACGCTTGGGTATTTCAAAAATGAGGAGAAAACTAAAGAAGTGTACAAGGTTGATGAAAAGGGAATGAGGTGGTTCTACA
CAGGAGACATAGGACGATTTCACCCTGATGGCTGCCTCGAGATAATAGACCGAAAAAAGGATATCGTTAAACTTCAGCATGGAGAATATGTCTCCTTGGG
CAAAGTTGAAGCTGCTCTAAGTATAAGTCCCTATGTTGAAAACATAATGGTTCATGCTGATTCGTTCTACAGTTACTGTGTGGCTCTTGTGGTCGCGTCC
CAACATACAGTTGAAGGTTGGGCTTCAAAGCAAGGAATAGACTTTGCCAACTTCGAAGAACTGTGCACGAAAGAGCAAGCCGTGAAAGAAGTGTATGCGT
CCCTTGTGAAGGCGGCTAAACAATCACGATTGGAGAAGTTTGAGATACCAGCAAAGATCAAATTATTGGCATCTCCATGGACGCCAGAGTCAGGATTAGT
CACAGCAGCTCTAAAGCTGAAAAGAGATGTAATTAGGAGGGAATTCTCTGAAGATCTCACCAAGTTATATGCCTAA
AT1G77590.1 cDNA Sequence 2321 bases
ATGATTCCTTATGCTGCTGGTGTTATTGTGCCATTGGCTTTGACGTTTCTGGTTCAGAAATCTAAGAAAGAAAAGAAAAGAGGTGTTGTTGTTGATGTTG
GTGGTGAACCAGGTTATGCTATTAGGAATCACAGGTTTACTGAGCCTGTTAGTTCCCATTGGGAACATATCTCAACGCTTCCAGAGCTCTTTGAGATATC
GTGTAATGCTCACAGTGATAGGGTTTTCCTTGGCACCCGAAAGCTGATCTCTAGAGAGATTGAGACTAGTGAGGATGGAAAAACGTTCGAGAAACTGCAT
TTAGGTGACTACGAGTGGCTCACTTTTGGGAAGACTCTCGAAGCAGTGTGTGATTTTGCCTCTGGGTTAGTTCAGATTGGGCACAAGACGGAAGAGCGTG
TCGCCATTTTTGCAGATACTAGAGAAGAATGGTTCATCTCCCTACAGGGTTGCTTCAGGCGCAACGTCACTGTGGTAACTATCTATTCATCTTTGGGAGA
GGAAGCTCTTTGTCACTCGCTGAATGAGACAGAGGTCACAACCGTAATATGTGGTAGCAAAGAACTCAAAAAGCTCATGGACATAAGCCAACAGCTTGAA
ACTGTGAAACGTGTGATATGCATGGATGATGAATTCCCATCTGATGTGAACAGTAATTGGATGGCGACTTCATTTACTGATGTTCAGAAACTTGGCCGCG
AAAATCCTGTGGATCCTAATTTCCCTCTCTCAGCAGATGTTGCTGTTATAATGTACACCAGTGGAAGCACTGGACTTCCCAAGGGTGTTATGATGACGCA
TGGTAATGTCCTAGCTACAGTTTCGGCAGTGATGACAATTGTTCCTGACCTTGGAAAGAGGGATATATACATGGCATATTTACCTTTGGCTCACATCCTT
GAGTTAGCAGCTGAGAGCGTAATGGCTACTATTGGGAGTGCTATTGGATATGGGTCTCCCTTGACGCTAACGGATACTTCAAACAAGATAAAAAAGGGTA
CAAAAGGAGATGTCACAGCACTAAAGCCCACTATAATGACAGCTGTTCCAGCCATTCTTGATCGTGTCAGGGATGGTGTCCGCAAAAAGGTTGATGCAAA
GGGCGGATTGTCAAAGAAATTGTTTGACTTTGCATATGCTCGGCGATTATCTGCAATCAATGGAAGTTGGTTTGGAGCCTGGGGATTGGAAAAGCTTTTG
TGGGATGTGCTTGTGTTCAGGAAAATCCGTGCAGTTTTGGGAGGTCAAATCCGCTATTTGCTCTCTGGTGGTGCCCCTCTTTCTGGTGACACTCAGAGAT
TCATTAACATCTGCGTTGGGGCTCCAATCGGTCAGGGATATGGGCTCACAGAGACTTGTGCTGGTGGAACCTTCTCGGAGTTTGAGGACACATCCGTTGG
CCGTGTTGGTGCTCCACTTCCTTGCTCCTTTGTAAAGCTAGTAGACTGGGCGGAAGGTGGGTATCTAACTAGTGATAAGCCGATGCCCCGTGGTGAAATT
GTAATTGGTGGCTCAAATATCACGCTTGGGTATTTCAAAAATGAGGAGAAAACTAAAGAAGTGTACAAGGTTGATGAAAAGGGAATGAGGTGGTTCTACA
CAGGAGACATAGGACGATTTCACCCTGATGGCTGCCTCGAGATAATAGACCGAAAAAAGGATATCGTTAAACTTCAGCATGGAGAATATGTCTCCTTGGG
CAAAGTTGAAGCTGCTCTAAGTATAAGTCCCTATGTTGAAAACATAATGGTTCATGCTGATTCGTTCTACAGTTACTGTGTGGCTCTTGTGGTCGCGTCC
CAACATACAGTTGAAGGTTGGGCTTCAAAGCAAGGAATAGACTTTGCCAACTTCGAAGAACTGTGCACGAAAGAGCAAGCCGTGAAAGAAGTGTATGCGT
CCCTTGTGAAGGCGGCTAAACAATCACGATTGGAGAAGTTTGAGATACCAGCAAAGATCAAATTATTGGCATCTCCATGGACGCCAGAGTCAGGATTAGT
CACAGCAGCTCTAAAGCTGAAAAGAGATGTAATTAGGAGGGAATTCTCTGAAGATCTCACCAAGTTATATGCCTAAATTTTTCTTCTTCCTTTACTTTTT
TTTTTTTTACGTCTCGATGCATTCGAAAGACTTAACAGATGCACAAAAACTTAATTCTAAGAATAGTTATCTCTTTTCTCATTGATGTTTCTGTCTTTTC
GTGTAATTTGTGTGGGAACTAGGACGAGACAGAAAAAACAGAGTAATGGGTCTCTTACTCTCAACAATCTTTTTAGGCTTTGAGACCATGTCTATACAAC
TTAATGGGCCTTTATCAAACC