ATIDB : The Arabidopsis thaliana Integrated Database

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Names and Synonyms

TOC33
AT1G02280.1
AT1G02280
ATTOC33
PLASTID PROTEIN IMPORT 1
PPI1
AT1G02280
T6A9.32

Gene Ontology Terms

GO:0009707 [AMIGO Graph]
Term : cellular_component, chloroplast outer membrane
Definition : The outer, i.e. cytoplasm-facing, lipid bilayer of the chloroplast envelope.

GO:0045036 [AMIGO Graph]
Term : biological_process, protein targeting to chloroplast
Definition : The process of directing proteins towards the chloroplast using signals contained within the protein. Imported proteins are synthesized as cytosolic precursors containing N-terminal uptake-targeting sequences that direct each protein to its correct subcompartment and are subsequently cleaved.

GO:0005515 [AMIGO Graph]
Term : molecular_function, protein binding
Definition : Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

GO:0005525 [AMIGO Graph]
Term : molecular_function, GTP binding
Definition : Interacting selectively with GTP, guanosine triphosphate.

GO:0003924 [AMIGO Graph]
Term : molecular_function, GTPase activity
Definition : Catalysis of the reaction: GTP + H2O = GDP + phosphate.

GO:0005525 [AMIGO Graph]
Term : molecular_function, GTP binding
Definition : Interacting selectively with GTP, guanosine triphosphate.

MIPS Functional Catalogue Classifications

[99] UNCLASSIFIED PROTEINS


Gene Predictions [*]

Functional Class Prediction Accuracy (%age) Predicted by rule
mfc:04.05.01.04 transcriptional control 76/91 83.52 [Struc mipsmanual 4 - Rule4]
mfc:05.01 ribosomal proteins 23/30 76.67 [Composite mipsmanual 2 - Rule441]


Gene Insertions

Flanking Sequence : T-DNA_LB.SALK_122849.21.35.x [Graphical View|Text]
Location : chromosome 1, base 449078-449079
Mapping Score 3 [see FAQ]


Design Validation Primers

Automatically design primers for insert validation

InterProScan results


Sequences

AT1G02280.1 Sequences

AT1G02280.1, Protein sequence 297 amino acids
MGSLVREWVGFQQFPAATQEKLIEFFGKLKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQ
VVRVSPFQAEGLRPVMVSRTMGGFTINIIDTPGLVEAGYVNHQALELIKGFLVNRTIDVL
LYVDRLDVYRVDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSPPDELSYETFSSKRSD
SLLKTIRAGSKMRKQEFEDSAIAVVYAENSGRCSKNDKDEKALPNGEAWIPNLVKAITDV
ATNQRKAIHVDKKMVDGSYSDDKGKKLIPLIIGAQYLIVKMIQGAIRNDIKTSGKPL*
AT1G02280.1 Sequence 1951 bases
GCGGAACACATCGAGAGAGCTTCTTCCAAAAACCTCAAACGCTCCTCACACAACGGTAAGCTCCTCCAAATCTCCCAAAACGTTATCGCTTTCGAAATTA
ATTATCATCATCGTCATCACTCAGCGATTATTTACCAAAAGAATTTTTTTGCTGAAGGGTTTAGGAGTGATGGGGTCTCTCGTTCGTGAATGGGTTGGGT
TTCAGCAATTTCCAGCAGCTACCCAGGAAAAGCTGATTGAATTCTTCGGAAAATTGAAGCAAAAGGTGTGTTTTGTTGTTGTTGTTCCTGTTTCTTTGGT
GCTTAAGTCGGTTTCTCGGATTCTCCGTTGTGATTAGGAGATAATGATGGGAGGTTTTTGTAATTGCAGGATATGAACTCAATGACAGTTCTTGTTCTGG
GTAAAGGCGGTGTCGGAAAATCATCCACTGTCAATTCTCTTATCGGCGAACAAGTCGTCCGTGTCAGTCCTTTCCAAGTACGTAATTCAGTTTCCCTAAG
CTTGATTTTTTTAATTTGGATTAAGAAAGAGTAGTCATTTCAAGATATTTGATGGCTCTGTTTTGTTGATTTTGTAGGCTGAAGGATTGAGACCAGTGAT
GGTTTCAAGAACAATGGGAGGGTTCACTATCAACATTATTGACACCCCTGGACTTGTGGAAGCTGGATATGTCAATCACCAAGCTCTCGAGTTAATCAAA
GGGTCAGTAGCTACTCTTTTGGAATATCTCTTCGTTGATTGTTGCATATAGGATTATCTCATTCGTTTTTGAATTAATTAAGCTAAGTATATATGTGGTT
AACATGTTTACTTGTGGGTTTCTGTTGAAATTGTGAATTATGAGTATCTGGTTTACGCTGAAGCTGTATATTGGAGTGTGTGTGGAAGTTTTACGATAGT
TGTTGTGTTTCTCGGATTTTGGACAGGTTTCTTGTGAACAGAACAATAGATGTCTTGCTCTATGTTGATCGTTTGGATGTGTATAGAGTCGATGAGCTAG
ATAAGCAAGTTGTTATAGCAATCACCCAAACCTTTGGAAAAGAGATATGGTGCAAAACCTTGCTTGTTCTGACTCATGCTCAATTTTCCCCTCCCGATGA
ACTTTCCTACGAAACTTTTTCCTCCAAGAGATCAGATTCTCTCCTCAAAACTATCCGGGCTGGTTCTAAGATGCGAAAACAAGAGTTTGAGGTATGGTTA
TTTATACATATACCTGTCTCCGAAAATTGTTATACCAATGTATGTTTGGTTCATTGTAGCAAGAATCAGTTTCATTCTTTACTGGCTTGTAGGATTCTGC
AATCGCGGTAGTCTATGCAGAGAACAGCGGAAGATGCAGCAAGAACGATAAGGACGAAAAGGTTTGTGTTTTCGAATCTCTGATTTGATCCGACTTGGAG
AGAGACTGACTGTTAAAAGTTGCTTACCTGCTCTCGGTTCAGGCTCTTCCAAATGGTGAAGCGTGGATCCCGAACTTGGTTAAGGCGATAACTGATGTAG
CAACAAACCAGAGGAAAGCAATTCATGTAGACAAGAAGATGGTAGATGGATCTTACTCTGATGATAAAGGAAAGAAACTCATCCCTCTTATCATAGGCGC
TCAGGTAAGAAAGAGACACAGTTTGATTTATTGTCTTGTTCGAATTTGGTAAACAAGTGAAATCCTTTCTTCTACTTTGCAGTATTTGATCGTTAAGATG
ATTCAAGGAGCAATCAGAAATGATATCAAGACAAGTGGAAAGCCACTTTAAGAGGCTCTGAAGAAGAGGTTTTGTTGTGAGCAAATTACAAGGAGAAGAA
GAGTTTTTCGATTGTTCTTTCTTTTGTTAGATTTTATCTGCAACATTTTCTTGTTTCCGGCTTTATCTTTGTCTGTAATTTATGGAGATTTGTTCAAAGA
AAAGATTGCCATGCTTTCTGGTTAAATGAAATGGATGTTTCCCAATCATAA
AT1G02280.1 Coding Sequence (CDS) 891 bases
ATGGGGTCTCTCGTTCGTGAATGGGTTGGGTTTCAGCAATTTCCAGCAGCTACCCAGGAAAAGCTGATTGAATTCTTCGGAAAATTGAAGCAAAAGGATA
TGAACTCAATGACAGTTCTTGTTCTGGGTAAAGGCGGTGTCGGAAAATCATCCACTGTCAATTCTCTTATCGGCGAACAAGTCGTCCGTGTCAGTCCTTT
CCAAGCTGAAGGATTGAGACCAGTGATGGTTTCAAGAACAATGGGAGGGTTCACTATCAACATTATTGACACCCCTGGACTTGTGGAAGCTGGATATGTC
AATCACCAAGCTCTCGAGTTAATCAAAGGGTTTCTTGTGAACAGAACAATAGATGTCTTGCTCTATGTTGATCGTTTGGATGTGTATAGAGTCGATGAGC
TAGATAAGCAAGTTGTTATAGCAATCACCCAAACCTTTGGAAAAGAGATATGGTGCAAAACCTTGCTTGTTCTGACTCATGCTCAATTTTCCCCTCCCGA
TGAACTTTCCTACGAAACTTTTTCCTCCAAGAGATCAGATTCTCTCCTCAAAACTATCCGGGCTGGTTCTAAGATGCGAAAACAAGAGTTTGAGGATTCT
GCAATCGCGGTAGTCTATGCAGAGAACAGCGGAAGATGCAGCAAGAACGATAAGGACGAAAAGGCTCTTCCAAATGGTGAAGCGTGGATCCCGAACTTGG
TTAAGGCGATAACTGATGTAGCAACAAACCAGAGGAAAGCAATTCATGTAGACAAGAAGATGGTAGATGGATCTTACTCTGATGATAAAGGAAAGAAACT
CATCCCTCTTATCATAGGCGCTCAGTATTTGATCGTTAAGATGATTCAAGGAGCAATCAGAAATGATATCAAGACAAGTGGAAAGCCACTTTAA
AT1G02280.1 cDNA Sequence 1161 bases
GCGGAACACATCGAGAGAGCTTCTTCCAAAAACCTCAAACGCTCCTCACACAACGGGTTTAGGAGTGATGGGGTCTCTCGTTCGTGAATGGGTTGGGTTT
CAGCAATTTCCAGCAGCTACCCAGGAAAAGCTGATTGAATTCTTCGGAAAATTGAAGCAAAAGGATATGAACTCAATGACAGTTCTTGTTCTGGGTAAAG
GCGGTGTCGGAAAATCATCCACTGTCAATTCTCTTATCGGCGAACAAGTCGTCCGTGTCAGTCCTTTCCAAGCTGAAGGATTGAGACCAGTGATGGTTTC
AAGAACAATGGGAGGGTTCACTATCAACATTATTGACACCCCTGGACTTGTGGAAGCTGGATATGTCAATCACCAAGCTCTCGAGTTAATCAAAGGGTTT
CTTGTGAACAGAACAATAGATGTCTTGCTCTATGTTGATCGTTTGGATGTGTATAGAGTCGATGAGCTAGATAAGCAAGTTGTTATAGCAATCACCCAAA
CCTTTGGAAAAGAGATATGGTGCAAAACCTTGCTTGTTCTGACTCATGCTCAATTTTCCCCTCCCGATGAACTTTCCTACGAAACTTTTTCCTCCAAGAG
ATCAGATTCTCTCCTCAAAACTATCCGGGCTGGTTCTAAGATGCGAAAACAAGAGTTTGAGGATTCTGCAATCGCGGTAGTCTATGCAGAGAACAGCGGA
AGATGCAGCAAGAACGATAAGGACGAAAAGGCTCTTCCAAATGGTGAAGCGTGGATCCCGAACTTGGTTAAGGCGATAACTGATGTAGCAACAAACCAGA
GGAAAGCAATTCATGTAGACAAGAAGATGGTAGATGGATCTTACTCTGATGATAAAGGAAAGAAACTCATCCCTCTTATCATAGGCGCTCAGTATTTGAT
CGTTAAGATGATTCAAGGAGCAATCAGAAATGATATCAAGACAAGTGGAAAGCCACTTTAAGAGGCTCTGAAGAAGAGGTTTTGTTGTGAGCAAATTACA
AGGAGAAGAAGAGTTTTTCGATTGTTCTTTCTTTTGTTAGATTTTATCTGCAACATTTTCTTGTTTCCGGCTTTATCTTTGTCTGTAATTTATGGAGATT
TGTTCAAAGAAAAGATTGCCATGCTTTCTGGTTAAATGAAATGGATGTTTCCCAATCATAA